RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 DONSONQ9NYP3 566 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 PACSIN2Q9UNF0 486 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 F5P12259 2224 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 PRR33A8MZF0 331 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
TCOF1-210ENST00000506767 KRT1P04264 644 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 CDKN2BP42772 138 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 NDST2P52849 883 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 YBEYP58557 167 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-210ENST00000506767 MRPS21P82921 87 aaKnown RBP13.17□□□□□ -0.3
TCOF1-210ENST00000506767 GAS6Q14393 721 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 EMC10Q5UCC4 262 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 MFSD7Q6UXD7 560 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 LZTR1Q8N653 840 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 NPWQ8N729 165 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 PQLC3Q8N755 202 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 CCDC26Q8TAB7 109 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 ALG3Q92685 438 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 ARHGEF2Q92974 986 aaKnown RBP13.17□□□□□ -0.3
TCOF1-210ENST00000506767 RNF157Q96PX1 679 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 ALS2CR12Q96Q35 445 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 PRDM16Q9HAZ2 1276 aa13.17□□□□□ -0.3
TCOF1-210ENST00000506767 THAP10Q9P2Z0 257 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-210ENST00000506767 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-210ENST00000506767 TRIOO75962 3097 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 CXorf51AA0A1B0GTR3 108 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 CHURC1-FNTBB4DL54 471 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 RAMP2O60895 175 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 RNF40O75150 1001 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 ZMPSTE24O75844 475 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 ASLP04424 464 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 ATP5BP06576 529 aaKnown RBP13.16□□□□□ -0.3
TCOF1-210ENST00000506767 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
TCOF1-210ENST00000506767 ETFBP38117 255 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 MAGEA9P43362 315 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-210ENST00000506767 RWDD2BP57060 319 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 COPS2P61201 443 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 ENPP2Q13822 863 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 POLD3Q15054 466 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-210ENST00000506767 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
TCOF1-210ENST00000506767 PTPRNQ16849 979 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 PARP15Q460N3 678 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 NCBP2-AS2Q69YL0 99 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 SLC9A4Q6AI14 798 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 TMCO3Q6UWJ1 677 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 Q6ZS52 159 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 ARHGAP12Q8IWW6 846 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 FBXL6Q8N531 539 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 UBL4BQ8N7F7 174 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 DCAF4L2Q8NA75 395 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 OR7D4Q8NG98 312 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 MYO19Q96H55 970 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 RBM41Q96IZ5 413 aaKnown RBP13.16□□□□□ -0.3
TCOF1-210ENST00000506767 MRGPRX3Q96LB0 322 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 SLC39A8Q9C0K1 460 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 MUC3BQ9H195 1237 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 CHRDQ9H2X0 955 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
TCOF1-210ENST00000506767 RASA4BC9J798 803 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 NPC1O15118 1278 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 RASA4O43374 803 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 DCNP07585 359 aaKnown RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 SRPRAP08240 638 aaKnown RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 DLDP09622 509 aaKnown RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 PYGMP11217 842 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 PTPN7P35236 360 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 TIE1P35590 1138 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 ACVRL1P37023 503 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 CTSOP43234 321 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 SEC13P55735 322 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 SERINC3Q13530 473 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 E2F5Q15329 346 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 PPP2R5EQ16537 467 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 HSF5Q4G112 596 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 C2orf27AQ580R0 203 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 ODF2Q5BJF6 829 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 PKN3Q6P5Z2 889 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 PLD5Q8N7P1 536 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 ZNF513Q8N8E2 541 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 KDM1BQ8NB78 822 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 RPLP0P6Q8NHW5 317 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 ACDQ96AP0 544 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 ACOX2Q99424 681 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 IER2Q9BTL4 223 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 C2orf49Q9BVC5 232 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-210ENST00000506767 TLR10Q9BXR5 811 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms