RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 FNTAP49354 379 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 DYNLT1P63172 113 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 GNA12Q03113 381 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 GBE1Q04446 702 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 GAD2Q05329 585 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 PPIDQ08752 370 aaKnown RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 NR1H3Q13133 447 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 SERINC3Q13530 473 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 RUNX3Q13761 415 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 BYSLQ13895 437 aaKnown RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 POLD3Q15054 466 aaPredicted RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 PDK1Q15118 436 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 PARP15Q460N3 678 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 C6orf118Q5T5N4 469 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 TRIM68Q6AZZ1 485 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 C1orf228Q6PIY5 440 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 TPGS1Q6ZTW0 290 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 TFAP2DQ7Z6R9 452 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 ADAT2Q7Z6V5 191 aaKnown RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 CTAGE6Q86UF2 777 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 CIR1Q86X95 450 aaPredicted RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 CTAGE4Q8IX94 777 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 TP53INP2Q8IXH6 220 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 ETFBKMTQ8IXQ9 262 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 YAF2Q8IY57 180 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 MMGT1Q8N4V1 131 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.38□□□□□ -1.23
NUP54-204ENST00000506098 OR52K2Q8NGK3 314 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 ATL2Q8NHH9 583 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 WFDC5Q8TCV5 224 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 C1orf54Q8WWF1 131 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 ARHGEF2Q92974 986 aaKnown RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 RUNDC3BQ96NL0 473 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 KXD1Q9BQD3 176 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 CARD6Q9BX69 1037 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 BBS2Q9BXC9 721 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 ACE2Q9BYF1 805 aaPredicted RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 SLC39A8Q9C0K1 460 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 EBF3Q9H4W6 596 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 ECT2Q9H8V3 914 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 RBM12Q9NTZ6 932 aaKnown RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 KIAA1522Q9P206 1035 aaPredicted RBP7.38□□□□□ -1.23
NUP54-204ENST00000506098 PRKAG3Q9UGI9 489 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 DNPEPQ9ULA0 475 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 SLC27A6Q9Y2P4 619 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 HEY1Q9Y5J3 304 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 TRPM6Q9BX84 2022 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 PLXNA2O75051 1894 aa7.38□□□□□ -1.23
NUP54-204ENST00000506098 PLXNB3Q9ULL4 1909 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 CFAP69A5D8W1 941 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 OTOL1A6NHN0 477 aaPredicted RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 C19orf67A6NJJ6 358 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 RASA4BC9J798 803 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 NEDD8-MDP1E9PL57 170 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 PPP1R12AO14974 1030 aaPredicted RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 MCF2LO15068 1137 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 RASA4O43374 803 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 KDELR3O43731 214 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 MAFKO60675 156 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 RAMP2O60895 175 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 RHOCP08134 193 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 CISD3P0C7P0 127 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 ADH5P11766 374 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 IL9P15248 144 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 ARSAP15289 507 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 GDI1P31150 447 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 STIP1P31948 543 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 EIF2DP41214 584 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 PAPOLAP51003 745 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 EIF3EP60228 445 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 TUBB4BP68371 445 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 LMNB2Q03252 620 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 TFF2Q03403 129 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 TNK2Q07912 1038 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 IL10RBQ08334 325 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 GRM2Q14416 872 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 DMC1Q14565 340 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 PRKD1Q15139 912 aaPredicted RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 AAK1Q2M2I8 961 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 ANO4Q32M45 955 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 SLC45A4Q5BKX6 768 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 FSCBQ5H9T9 825 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 TTC27Q6P3X3 843 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 CCDC137Q6PK04 289 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 MFN1Q8IWA4 741 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 ADHFE1Q8IWW8 467 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 PHTF2Q8N3S3 785 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 CARNMT1Q8N4J0 409 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 SLC44A3Q8N4M1 653 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 CPA6Q8N4T0 437 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 TTC16Q8NEE8 873 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 GRK7Q8WTQ7 553 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 TFB1MQ8WVM0 346 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 RSAD2Q8WXG1 361 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 ATG4AQ8WYN0 398 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 MAGOHBQ96A72 148 aaKnown RBP7.37□□□□□ -1.23
NUP54-204ENST00000506098 HAUS1Q96CS2 278 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 RTP4Q96DX8 246 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 HMCESQ96FZ2 354 aa7.37□□□□□ -1.23
NUP54-204ENST00000506098 ZFYVE19Q96K21 471 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms