RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TMEM245Q9H330 911 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 C8orf33Q9H7E9 229 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ARHGEF3Q9NR81 526 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SAE1Q9UBE0 346 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TTC7AQ9ULT0 858 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 HS3ST2Q9Y278 367 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 JRKLQ9Y4A0 524 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ACTL7AQ9Y615 435 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 DOCK9Q9BZ29 2069 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 LRRK1Q38SD2 2015 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 A0A1W2PQF6 199 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 KANSL1LA0AUZ9 987 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PDE2AO00408 941 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 FGF10O15520 208 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SMAD6O43541 496 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PI15O43692 258 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SPOPO43791 374 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CREB3O43889 395 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ZRANB2O95218 330 aaKnown RBP eCLIP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 KAT7O95251 611 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 EGFP01133 1207 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PRLRP16471 622 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CSKP41240 450 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CTSOP43234 321 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 NDST2P52849 883 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 RWDD2BP57060 319 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TPI1P60174 286 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 COPS2P61201 443 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ETF1P62495 437 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 GNA12Q03113 381 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 GALNT2Q10471 571 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF211Q13398 564 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SERINC3Q13530 473 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 HADHQ16836 314 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ANO4Q32M45 955 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TFDP3Q5H9I0 405 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PITRM1Q5JRX3 1037 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF569Q5MCW4 686 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 FAM182AQ5T1J6 154 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 EMC10Q5UCC4 262 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF783Q6ZMS7 281 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TRIM67Q6ZTA4 783 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 BBS12Q6ZW61 710 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 BMP8AQ7Z5Y6 402 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CREG2Q8IUH2 290 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MFN1Q8IWA4 741 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 RCOR2Q8IZ40 523 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TXLNBQ8N3L3 684 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CPA6Q8N4T0 437 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 IL17RCQ8NAC3 791 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TTC16Q8NEE8 873 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 OR7D4Q8NG98 312 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SLC35B2Q8TB61 432 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 DDI1Q8WTU0 396 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 FRS2Q8WU20 508 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MAML1Q92585 1016 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 RNF34Q969K3 372 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 MSANTD3Q96H12 275 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 TSGA13Q96PP4 275 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 PNKPQ96T60 521 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ACOX2Q99424 681 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 EPAS1Q99814 870 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 P2RY13Q9BPV8 354 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 FOXQ1Q9C009 403 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 EPHX3Q9H6B9 360 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 LTB4R2Q9NPC1 389 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 DNAJC17Q9NVM6 304 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 DDX56Q9NY93 547 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 SLC12A6Q9UHW9 1150 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 DNAI1Q9UI46 699 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 GGA2Q9UJY4 613 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 AMFRQ9UKV5 643 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 CA14Q9ULX7 337 aa5.07□□□□□ -1.6
LMNB1-208ENST00000504788 R3HDM2Q9Y2K5 976 aaKnown RBP5.07□□□□□ -1.6
LMNB1-208ENST00000504788 WDR87Q6ZQQ6 2873 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 MYLKQ15746 1914 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 TNRC6BQ9UPQ9 1833 aaKnown RBP5.06□□□□□ -1.6
LMNB1-208ENST00000504788 SCN8AQ9UQD0 1980 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 NUMA1Q14980 2115 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 LRRD1A4D1F6 860 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 GOLGA6L9A6NEM1 432 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 WASH3PC4AMC7 463 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 RASA4BC9J798 803 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 J3KR12 359 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 K7ERQ8 282 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 CES2O00748 559 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 MUSKO15146 869 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF185O15231 689 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 RASA4O43374 803 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 DCXO43602 365 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 SNAP91O60641 907 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 CST8O60676 142 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 MAP3K6O95382 1288 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 KRT1P04264 644 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 PABPC1P11940 636 aaKnown RBP5.06□□□□□ -1.6
LMNB1-208ENST00000504788 TDGF1P13385 188 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 CR2P20023 1033 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 OR1E1P30953 314 aa5.06□□□□□ -1.6
LMNB1-208ENST00000504788 CXCR5P32302 372 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms