RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PYGMP11217 842 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 DRD1P21728 446 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 HTR7P34969 479 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 CDKN2BP42772 138 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 MAPKAPK2P49137 400 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 RWDD2BP57060 319 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 ADCY2Q08462 1091 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 CCINQ13939 588 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 C2orf27AQ580R0 203 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 C6orf118Q5T5N4 469 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 DCAF12L1Q5VU92 463 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 EGFLAMQ63HQ2 1017 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 NCBP2-AS2Q69YL0 99 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 PKN3Q6P5Z2 889 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 C1orf228Q6PIY5 440 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 NPNTQ6UXI9 565 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 SETD3Q86TU7 594 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 CCDC105Q8IYK2 499 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 RCOR2Q8IZ40 523 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 AHI1Q8N157 1196 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 TRIM58Q8NG06 486 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 PJA1Q8NG27 643 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 NUP205Q92621 2012 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 ARHGEF2Q92974 986 aaKnown RBP13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 TRIM44Q96DX7 344 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 HMCESQ96FZ2 354 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF670Q9BS34 389 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 VPS28Q9UK41 221 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 WDFY4Q6ZS81 3184 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 A0A0A0MRY4 1105 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 ILVBLA1L0T0 632 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 WASH3PC4AMC7 463 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 RASA4BC9J798 803 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 DFFAO00273 331 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 RASA4O43374 803 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 MFSD11O43934 449 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 KIF5CO60282 957 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 RAMP2O60895 175 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 POLR2EP19388 210 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 TNFRSF4P43489 277 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 KIR2DL1P43626 348 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 STK19P49842 368 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF135P52742 658 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 POLD3Q15054 466 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 RPS6KA1Q15418 735 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 TMCO3Q6UWJ1 677 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 LINGO4Q6UY18 593 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 ARHGAP36Q6ZRI8 547 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF354CQ86Y25 554 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 SUGP1Q8IWZ8 645 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 UMODL1-AS1Q8N2C9 162 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 UBL4BQ8N7F7 174 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 EXD1Q8NHP7 514 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 WFIKKN2Q8TEU8 576 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 EXOC4Q96A65 974 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 PBXIP1Q96AQ6 731 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 RPL10LQ96L21 214 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 TLR10Q9BXR5 811 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 MAK16Q9BXY0 300 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 LRRC19Q9H756 370 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 ATP13A1Q9HD20 1204 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 RCOR3Q9P2K3 495 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 SIT1Q9Y3P8 196 aa13.59□□□□□ -0.23
PDLIM7-212ENST00000504380 TRIOO75962 3097 aa13.58□□□□□ -0.23
PDLIM7-212ENST00000504380 hCG_1818297A0A087WSY0 165 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 MIF4GDA9UHW6 222 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 CBX4O00257 560 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 KLF8O95600 359 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 ATP1A1P05023 1023 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 PAPOLAP51003 745 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 PLK1P53350 603 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 OXCT1P55809 520 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 GNG11P61952 73 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 GBE1Q04446 702 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 SLC10A2Q12908 348 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 GAS6Q14393 721 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 TAZQ16635 292 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 PREPLQ4J6C6 727 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 TFDP3Q5H9I0 405 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 AFMIDQ63HM1 303 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 B4GALNT4Q76KP1 1039 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 ALLCQ8N6M5 410 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF366Q8N895 744 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF557Q8N988 423 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 USP33Q8TEY7 942 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 TTC17Q96AE7 1141 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 HAUS1Q96CS2 278 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 WDR24Q96S15 920 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 NELL2Q99435 816 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms