RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 OTUD1Q5VV17 481 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 RHBDF2Q6PJF5 856 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 SLC16A12Q6ZSM3 486 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PIK3AP1Q6ZUJ8 805 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PCGF5Q86SE9 256 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 RPAINQ86UA6 219 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 TTC30AQ86WT1 665 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 CCDC28AQ8IWP9 274 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 RFLNBQ8N5W9 214 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 ADPRHL1Q8NDY3 354 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 RTP4Q96DX8 246 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 URB1-AS1Q96HZ7 61 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 NUDT22Q9BRQ3 303 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 C1QTNF4Q9BXJ3 329 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 RETREG1Q9H6L5 497 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 CATSPERBQ9H7T0 1116 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 UBE2J1Q9Y385 318 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 A0A087WZ62 844 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC194A0A1B0GVG4 234 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 A0A1B0GVT2 93 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 BECN2A8MW95 431 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 INAFM1C9JVW0 142 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CTAGE5O15320 804 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 RGS14O43566 566 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 DHX16O60231 1041 aaKnown RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 VIPP01282 170 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 LCKP06239 509 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 RNF224P0DH78 156 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 FCGR1AP12314 374 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 MYL4P12829 197 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CASQ1P31415 396 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC37A1P57057 533 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 DMTNQ08495 405 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 GPS2Q13227 327 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 DCTN1Q14203 1278 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 GALNT3Q14435 633 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ALG10Q5BKT4 473 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ALG10BQ5I7T1 473 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 C10orf76Q5T2E6 689 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 PLEKHA7Q6IQ23 1121 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 WDR93Q6P2C0 686 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CTR9Q6PD62 1173 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CREB3L2Q70SY1 520 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 BEND5Q7L4P6 421 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 KDELC2Q7Z4H8 507 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 MYPOPQ86VE0 399 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CAMK1DQ8IU85 385 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CADM3Q8N126 398 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 PAQR4Q8N4S7 273 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 PDILTQ8N807 584 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ATP11CQ8NB49 1132 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF485Q8NCK3 441 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 MNS1Q8NEH6 495 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 GABPB2Q8TAK5 448 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF419Q96HQ0 510 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 FAR2Q96K12 515 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF347Q96SE7 839 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 RSPH9Q9H1X1 276 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 SUDS3Q9H7L9 328 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CWC25Q9NXE8 425 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 ODF2LQ9ULJ1 636 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 MAGED2Q9UNF1 606 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CORO2BQ9UQ03 480 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 SMC3Q9UQE7 1217 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 TNFSF13BQ9Y275 285 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 DTX4Q9Y2E6 619 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 KNSTRNQ9Y448 316 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 CEP83Q9Y592 693 aa2.27□□□□□ -2.05
HMGB3P17-201ENST00000504195 FRMPD2Q68DX3 1309 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 RAD50Q92878 1312 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 PLSCR5A0PG75 271 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 OR2W5A6NFC9 320 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 M0QZQ0 153 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 KIF3BO15066 747 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 NPC1O15118 1278 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 MSI1O43347 362 aaKnown RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 HMMRO75330 724 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 IPO7O95373 1038 aaKnown RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 BAG4O95429 457 aaKnown RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 F7P08709 466 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 SRGAP2BP0DMP2 458 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 ANOS1P23352 680 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 BDNFP23560 247 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZP1P60852 638 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 ERVK11-1P61568 191 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 EEF1A2Q05639 463 aaKnown RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 LMOD3Q0VAK6 560 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 TRDNQ13061 729 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 SEMA5AQ13591 1074 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 GBX1Q14549 363 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 GRM3Q14832 879 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC5A9Q2M3M2 681 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 FNBP1LQ5T0N5 605 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 C16orf89Q6UX73 402 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC73Q6ZRK6 1079 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 H1FNTQ75WM6 255 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 GET4Q7L5D6 327 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 ARMC9Q7Z3E5 817 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 GPSM1Q86YR5 675 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC33Q8N5R6 958 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms