RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SLC44A5Q8NCS7 719 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 ADPRHL1Q8NDY3 354 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 OR6Y1Q8NGX8 325 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 KAT2AQ92830 837 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 EME1Q96AY2 570 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 P2RY11Q96G91 374 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 PIMREGQ9BSJ6 248 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 DDX23Q9BUQ8 820 aaKnown RBP4.51□□□□□ -1.69
SUB1-204ENST00000504016 SLCO5A1Q9H2Y9 848 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 ARL15Q9NXU5 204 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 KIF17Q9P2E2 1029 aa4.51□□□□□ -1.69
SUB1-204ENST00000504016 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.51□□□□□ -1.69
SUB1-204ENST00000504016 TMEM272A0A1B0GTI8 110 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 FAM90A20PA6NIJ5 464 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 MBD3L5A6NJ08 208 aaPredicted RBP4.5□□□□□ -1.69
SUB1-204ENST00000504016 C4orf47A7E2U8 309 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 ZNF814B7Z6K7 855 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 F8W810 466 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 IFRD1O00458 451 aaPredicted RBP4.5□□□□□ -1.69
SUB1-204ENST00000504016 ZC3H11AO75152 810 aaKnown RBP eCLIP4.5□□□□□ -1.693e-9■□□□□ 10.4
SUB1-204ENST00000504016 PRPH2P23942 346 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 CST5P28325 142 aaPredicted RBP4.5□□□□□ -1.69
SUB1-204ENST00000504016 GALNT3Q14435 633 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 ANKRD45Q5TZF3 282 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 MTFR2Q6P444 385 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 TMEM88Q6PEY1 159 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 SLC30A9Q6PML9 568 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 RFX8Q6ZV50 586 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 FTSJ3Q8IY81 847 aaKnown RBP4.5□□□□□ -1.69
SUB1-204ENST00000504016 TMEM217Q8N7C4 229 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 EXD3Q8N9H8 876 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 FAM47BQ8NA70 645 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 LINS1Q8NG48 757 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 FAM110DQ8TAY7 271 aaPredicted RBP4.5□□□□□ -1.69
SUB1-204ENST00000504016 ASB5Q8WWX0 329 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 ATP2A3Q93084 1043 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 TRIM63Q969Q1 353 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 ZNF419Q96HQ0 510 aaPredicted RBP4.5□□□□□ -1.69
SUB1-204ENST00000504016 PIGSQ96S52 555 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 TMEM204Q9BSN7 226 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 HERC2P3Q9BVR0 1158 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 TRIM31Q9BZY9 425 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 SAYSD1Q9NPB0 183 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 TNFSF13BQ9Y275 285 aa4.5□□□□□ -1.69
SUB1-204ENST00000504016 EME2A4GXA9 379 aaPredicted RBP4.49□□□□□ -1.69
SUB1-204ENST00000504016 RHODO00212 210 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 SYN3O14994 580 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 TPD52L2O43399 206 aaKnown RBP4.49□□□□□ -1.69
SUB1-204ENST00000504016 TLX3O43711 291 aaPredicted RBP4.49□□□□□ -1.69
SUB1-204ENST00000504016 SLC28A2O43868 658 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 EPN2O95208 641 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 DHRS4L1P0CG22 281 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 CHRNB1P11230 501 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ACP5P13686 325 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 IGFBP2P18065 325 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 KLRC2P26717 231 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ADD2P35612 726 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ZXDBP98169 803 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 GAD2Q05329 585 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ZBTB16Q05516 673 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 TBRG1Q3YBR2 411 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 KIAA1755Q5JYT7 1200 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 C10orf76Q5T2E6 689 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 DGAT2L7PQ6IED9 249 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 LDHAL6AQ6ZMR3 332 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 CYB5R4Q7L1T6 521 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 TMEM199Q8N511 208 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 NKAPQ8N5F7 415 aaKnown RBP4.49□□□□□ -1.69
SUB1-204ENST00000504016 FSIP1Q8NA03 581 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 SPATA5Q8NB90 893 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ZFPM2Q8WW38 1151 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 RBM17Q96I25 401 aaKnown RBP4.49□□□□□ -1.69
SUB1-204ENST00000504016 PSMD1Q99460 953 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ZNF304Q9HCX3 659 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
SUB1-204ENST00000504016 MSRB1Q9NZV6 116 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 FEM1BQ9UK73 627 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 PCDHA12Q9UN75 941 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 ICKQ9UPZ9 632 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 LAMP3Q9UQV4 416 aa4.49□□□□□ -1.69
SUB1-204ENST00000504016 NPIPB13A6NJU9 1138 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 NPIPB5A8MRT5 1133 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 NPIPB4C9JG80 1138 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 MCIDASD6RGH6 385 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 STX16-NPEPL1H3BU86 382 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 STX16O14662 325 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 MSI1O43347 362 aaKnown RBP4.48□□□□□ -1.69
SUB1-204ENST00000504016 WNT1P04628 370 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 NGFRP08138 427 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 CSF1P09603 554 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 PKMP14618 531 aaKnown RBP4.48□□□□□ -1.69
SUB1-204ENST00000504016 CHN1P15882 459 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 AVPR2P30518 371 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 ADPRHP54922 357 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 PPATQ06203 517 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 DCTN1Q14203 1278 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 SMTNL2Q2TAL5 461 aa4.48□□□□□ -1.69
SUB1-204ENST00000504016 ZNF484Q5JVG2 852 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms