RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RFTN1Q14699 578 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TEAD2Q15562 447 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TRADDQ15628 312 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 HIF1AQ16665 826 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 FAM153CQ494X1 144 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 MPPE1Q53F39 396 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ALFQ53S48 1182 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 DNAJC21Q5F1R6 531 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ARTNQ5T4W7 220 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 LRIG3Q6UXM1 1119 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 GRASPQ7Z6J2 395 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TFAP2DQ7Z6R9 452 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ADGRD2Q7Z7M1 963 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CNPY4Q8N129 248 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 EFHBQ8N7U6 833 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 GLIS1Q8NBF1 620 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 VN1R2Q8NFZ6 395 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CCDC110Q8TBZ0 833 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CPT1BQ92523 772 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 MAML1Q92585 1016 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 PRCCQ92733 491 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 IGSF8Q969P0 613 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF707Q96C28 371 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 LRRC39Q96DD0 335 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TMA16Q96EY4 203 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CELF6Q96J87 481 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TEKT5Q96M29 485 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CYP2S1Q96SQ9 504 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 SLC46A2Q9BY10 475 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TXLNGYQ9BZA5 131 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 SLC39A8Q9C0K1 460 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 GBA3Q9H227 469 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 NEUROG2Q9H2A3 272 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 PABPC3Q9H361 631 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CERS4Q9HA82 394 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 SP110Q9HB58 689 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 XAB2Q9HCS7 855 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 SEPT10Q9P0V9 454 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CFAP97Q9P2B7 532 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF212Q9UDV6 495 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 FAM153AQ9UHL3 310 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 IPO11Q9UI26 975 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 HPCAL4Q9UM19 191 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TBC1D30Q9Y2I9 924 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ATP8A1Q9Y2Q0 1164 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 AAR2Q9Y312 384 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ZFP37Q9Y6Q3 630 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ANAPC1Q9H1A4 1944 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GOLGA6L7A0A1B0GV03 622 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GFRA2O00451 464 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 TP73O15350 636 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 OPA1O60313 960 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GREM1O60565 184 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 MOSPD3O75425 235 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ANXA9O76027 345 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 CNTN5O94779 1100 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 APRTP07741 180 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 RHOCP08134 193 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 SLC6A4P31645 630 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 CCR2P41597 374 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 IFNAR2P48551 515 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 LMAN1P49257 510 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GEMIN4P57678 1058 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GNA12Q03113 381 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 WASHC5Q12768 1159 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 USP4Q13107 963 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 SLC12A1Q13621 1099 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 LRIT3Q3SXY7 679 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 HSP90B2PQ58FF3 399 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 MARC1Q5VT66 337 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ARMC3Q5W041 872 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 DENND2CQ68D51 928 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 RFWD3Q6PCD5 774 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 LINC00523Q86TU6 105 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 METTL3Q86U44 580 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF354CQ86Y25 554 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 CCNJLQ8IV13 435 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF567Q8N184 647 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 CELF5Q8N6W0 485 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 TDRD5Q8NAT2 981 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ADAMTS19Q8TE59 1207 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 SH3RF2Q8TEC5 729 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 UBLCP1Q8WVY7 318 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ARHGEF2Q92974 986 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 E2F7Q96AV8 911 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 HMCESQ96FZ2 354 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 SLC22A12Q96S37 553 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 RBM15Q96T37 977 aaKnown RBP eCLIP8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 IL12RB2Q99665 862 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 C10orf88Q9H8K7 445 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 PPCSQ9HAB8 311 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ETNK1Q9HBU6 452 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 MED4Q9NPJ6 270 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 HCFC1R1Q9NWW0 138 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 OBP2AQ9NY56 170 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GDE1Q9NZC3 331 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 RSPH14Q9UHP6 348 aa8.31□□□□□ -1.08
TOPBP1-202ENST00000503338 GBF1Q92538 1859 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms