RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 KRT71Q3SY84 523 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 MGAT5BQ3V5L5 792 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ZNF568Q3ZCX4 644 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 RRAGBQ5VZM2 374 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 DSTYKQ6XUX3 929 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 LYSMD3Q7Z3D4 306 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SYT12Q8IV01 421 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ETFBKMTQ8IXQ9 262 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SLC15A3Q8IY34 581 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CMTM8Q8IZV2 173 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ARL10Q8N8L6 244 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 RBBP8NLQ8NC74 664 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 FAM13CQ8NE31 585 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 FBF1Q8TES7 1133 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 C17orf50Q8WW18 174 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CD101Q93033 1021 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CHFRQ96EP1 664 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SEPT5Q99719 369 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 PRMT1Q99873 361 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 FAM83CQ9BQN1 747 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 BRD8Q9H0E9 1235 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 DPH5Q9H2P9 285 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 VCXQ9H320 206 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ZHX3Q9H4I2 956 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 FBRSL1Q9HCM7 1045 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 ETNK2Q9NVF9 386 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 NMRK1Q9NWW6 199 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SAMD15Q9P1V8 674 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CIDEBQ9UHD4 219 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 EVLQ9UI08 416 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 NID2Q14112 1375 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CITO14578 2027 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 PI4KAP42356 2102 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 A0A0J9YVX5 310 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 A0A1W2PQJ5 194 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ARHGEF35A5YM69 484 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 TRIM49BA6NDI0 452 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 OR6C75A6NL08 312 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CCDC169A6NNP5 214 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 HNRNPRO43390 633 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 E2F6O75461 281 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 FAM13AO94988 1023 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 OAZ2O95190 189 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 AFPP02771 609 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 PDGFRBP09619 1106 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 VDRP11473 427 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 HARSP12081 509 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 GJA4P35212 333 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 EIF1AXP47813 144 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 IFI35P80217 286 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 SULT2A1Q06520 285 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SEMA3BQ13214 749 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CNGA2Q16280 664 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 C2orf27AQ580R0 203 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 TNFAIP8L3Q5GJ75 292 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CENPPQ6IPU0 288 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CGB2Q6NT52 195 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SLC23A3Q6PIS1 610 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ALKAL1Q6UXT8 129 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 PGBD3Q8N328 593 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CPA6Q8N4T0 437 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 GBP7Q8N8V2 638 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 ATAD1Q8NBU5 361 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 BEST2Q8NFU1 509 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 UBLCP1Q8WVY7 318 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 NRG4Q8WWG1 115 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SEC14L1Q92503 715 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 C18orf25Q96B23 403 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 RMDN2Q96LZ7 410 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 ZMAT2Q96NC0 199 aaKnown RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 POLR3CQ9BUI4 534 aaPredicted RBP4.66□□□□□ -1.66
MATR3-202ENST00000502422 KIFC3Q9BVG8 833 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SLC46A2Q9BY10 475 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CCDC113Q9H0I3 377 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CARD9Q9H257 536 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 BLZF1Q9H2G9 400 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 CRISPLD1Q9H336 500 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 PCDH18Q9HCL0 1135 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 HPS4Q9NQG7 708 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 TDP1Q9NUW8 608 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SCOCQ9UIL1 159 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 TNFSF13BQ9Y275 285 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 LRCH1Q9Y2L9 728 aa4.66□□□□□ -1.66
MATR3-202ENST00000502422 SHROOM3Q8TF72 1996 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 FLNBO75369 2602 aaKnown RBP4.65□□□□□ -1.66
MATR3-202ENST00000502422 MTMR11A4FU01 709 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 OTOL1A6NHN0 477 aaPredicted RBP4.65□□□□□ -1.66
MATR3-202ENST00000502422 EPHB6O15197 1021 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 BUB1O43683 1085 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 FZD6O60353 706 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 SOAT2O75908 522 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 TMCC1O94876 653 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 UNC5CO95185 931 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 ASLP04424 464 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 EDN1P05305 212 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 KCNE1P15382 129 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 BCKDHBP21953 392 aa4.65□□□□□ -1.66
MATR3-202ENST00000502422 EEF1GP26641 437 aaKnown RBP4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms