RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	LRRC49	Q8IUZ0	686 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	CFAP52	Q8N1V2	620 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	TDRD5	Q8NAT2	981 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	HJURP	Q8NCD3	748 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	OR52K2	Q8NGK3	314 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	OTUB2	Q96DC9	234 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	CELF6	Q96J87	481 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	FAM161B	Q96MY7	647 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	PNKP	Q96T60	521 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	LGMN	Q99538	433 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	ERP44	Q9BS26	406 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	POMK	Q9H5K3	350 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	PCDH9	Q9HC56	1237 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	TBC1D14	Q9P2M4	693 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	RAB21	Q9UL25	225 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	ZNF148	Q9UQR1	794 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	REV3L	O60673	3130 aa		12.46	□□□□□ -0.42
MATR3-231	ENST00000502394	SZT2	Q5T011	3432 aa		12.46	□□□□□ -0.42
MATR3-231	ENST00000502394	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	UQCRHL	A0A096LP55	91 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	RASA4B	C9J798	803 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	PPP1R12A	O14974	1030 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	RASA4	O43374	803 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	MAFK	O60675	156 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	ZNF189	O75820	626 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	GAS8	O95995	478 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	PENK	P01210	267 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	UQCRH	P07919	91 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	HOXD9	P28356	352 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	TNFRSF8	P28908	595 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	DRG2	P55039	364 aa	Known RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	KCTD19	Q17RG1	926 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	PARP15	Q460N3	678 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	MPPE1	Q53F39	396 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	FYB2	Q5VWT5	728 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	WDR93	Q6P2C0	686 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	DARS2	Q6PI48	645 aa	Known RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	ARHGAP36	Q6ZRI8	547 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	B4GALNT4	Q76KP1	1039 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	PRUNE1	Q86TP1	453 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	SETD3	Q86TU7	594 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	MICALL1	Q8N3F8	863 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	CCDC33	Q8N5R6	958 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	LRRN4	Q8WUT4	740 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	TFB1M	Q8WVM0	346 aa	Known RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	FATE1	Q969F0	183 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	TMA16	Q96EY4	203 aa	Known RBP	12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	HMCES	Q96FZ2	354 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	LMLN	Q96KR4	655 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	CCDC114	Q96M63	670 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	GUCD1	Q96NT3	240 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	MARK1	Q9P0L2	795 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	CD207	Q9UJ71	328 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	NUP205	Q92621	2012 aa		12.45	□□□□□ -0.42
MATR3-231	ENST00000502394	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ILVBL	A1L0T0	632 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	C5orf60	A6NFR6	353 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	TP73	O15350	636 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	RAMP2	O60895	175 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	TBL1X	O60907	577 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	LUC7L3	O95232	432 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	PEX11B	O96011	259 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	KRT14	P02533	472 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ZSCAN5DP	P0CG00	497 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ETS1	P14921	441 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	CCNC	P24863	283 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	OR1E1	P30953	314 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	VIPR2	P41587	438 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	PAPOLA	P51003	745 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	NRL	P54845	237 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	WASHC5	Q12768	1159 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	SERINC3	Q13530	473 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	TRADD	Q15628	312 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	CCDC70	Q6NSX1	233 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ZNF783	Q6ZMS7	281 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394		Q7L0L9	218 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ADGRG2	Q8IZP9	1017 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	FAM71D	Q8N9W8	422 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	WFDC5	Q8TCV5	224 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	BPIFB1	Q8TDL5	484 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	DEPDC1B	Q8WUY9	529 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	HTR3C	Q8WXA8	447 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	CASKIN2	Q8WXE0	1202 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	MYLIP	Q8WY64	445 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	MAML1	Q92585	1016 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ARHGEF2	Q92974	986 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ALG14	Q96F25	216 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ASIC4	Q96FT7	647 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	NECTIN4	Q96NY8	510 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	CDX2	Q99626	313 aa	Predicted RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	PARD6B	Q9BYG5	372 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	RAB17	Q9H0T7	212 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	MAGEH1	Q9H213	219 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	LINC00597	Q9H2U6	94 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	GRHL1	Q9NZI5	618 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	USP15	Q9Y4E8	981 aa	Predicted RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	OR51B4	Q9Y5P0	310 aa		12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	NYNRIN	Q9P2P1	1898 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-231	ENST00000502394	ARHGAP42	A6NI28	874 aa		12.43	□□□□□ -0.42
MATR3-231	ENST00000502394	HEPACAM2	A8MVW5	462 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms