RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	CIR1	Q86X95	450 aa	Predicted RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	SYT12	Q8IV01	421 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	TMEFF1	Q8IYR6	380 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	ABCA7	Q8IZY2	2146 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	DCAF4L2	Q8NA75	395 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	CEP76	Q8TAP6	659 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	NETO1	Q8TDF5	533 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	FNIP1	Q8TF40	1166 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	CPLX3	Q8WVH0	158 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	MRGPRX3	Q96LB0	322 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	EIF3C	Q99613	913 aa	Known RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	ISCU	Q9H1K1	167 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	PARD6A	Q9NPB6	346 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	NCKAP1	Q9Y2A7	1128 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	MUC22	E2RYF6	1773 aa	Predicted RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	SDK1	Q7Z5N4	2213 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658		I6L893	689 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	KHNYN	O15037	678 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	CCP110	O43303	1012 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SIN3B	O75182	1162 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	RNF8	O76064	485 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	CNTN5	O94779	1100 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	GJB6	O95452	261 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	GYPC	P04921	128 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	PLEK	P08567	350 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SKIL	P12757	684 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	GNS	P15586	552 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	PSMA2	P25787	234 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	L1CAM	P32004	1257 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	HTR7	P34969	479 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	GGCX	P38435	758 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ID4	P47928	161 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	MAPKAPK2	P49137	400 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	RPS14	P62263	151 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF33A	Q06730	810 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SLC20A2	Q08357	652 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ACAP1	Q15027	740 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	AASDH	Q4L235	1098 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ALF	Q53S48	1182 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	WDR45B	Q5MNZ6	344 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SH3PXD2A	Q5TCZ1	1133 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	E4F1	Q66K89	784 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	HGSNAT	Q68CP4	663 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	RETSAT	Q6NUM9	610 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	RWDD4	Q6NW29	188 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SCYL2	Q6P3W7	929 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	USP30	Q70CQ3	517 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	TMC6	Q7Z403	805 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	FRMD1	Q8N878	549 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF653	Q96CK0	615 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	TBC1D31	Q96DN5	1066 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ERLEC1	Q96DZ1	483 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ALG14	Q96F25	216 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	TOE1	Q96GM8	510 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	MYO19	Q96H55	970 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	RPL10L	Q96L21	214 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	CCDC114	Q96M63	670 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	EPAS1	Q99814	870 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SLC6A17	Q9H1V8	727 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SGK2	Q9HBY8	427 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	WSB2	Q9NYS7	404 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	TAS2R14	Q9NYV8	317 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	MPP6	Q9NZW5	540 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	CNOT8	Q9UFF9	292 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	SUSD2	Q9UGT4	822 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	ADAMTS1	Q9UHI8	967 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	EVL	Q9UI08	416 aa	Predicted RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	CDV3	Q9UKY7	258 aa	Known RBP	10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	HS3ST2	Q9Y278	367 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	OR51B4	Q9Y5P0	310 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	DMXL1	Q9Y485	3027 aa		10.79	□□□□□ -0.68
FXR1-222	ENST00000498658	DOCK4	Q8N1I0	1966 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	TMEM191C	A6NGB0	347 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	TTC34	A8MYJ7	566 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	ALOX15B	O15296	676 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	ATP9B	O43861	1147 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	ADH1B	P00325	375 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	RHOQ	P17081	205 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	HNRNPH3	P31942	346 aa	Known RBP	10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	CASP14	P31944	242 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	PTGER3	P43115	390 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	CTSO	P43234	321 aa	Predicted RBP	10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	IRAK1	P51617	712 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF135	P52742	658 aa	Predicted RBP	10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	LIMK1	P53667	647 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	GEMIN4	P57678	1058 aa	Known RBP	10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	GNA12	Q03113	381 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	CCDC15	Q0P6D6	951 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	ACCSL	Q4AC99	568 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	C9orf64	Q5T6V5	341 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	MANEAL	Q5VSG8	457 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	FAM46C	Q5VWP2	391 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	TFAP2D	Q7Z6R9	452 aa		10.78	□□□□□ -0.68
FXR1-222	ENST00000498658	PSTK	Q8IV42	348 aa	Known RBP	10.78	□□□□□ -0.68

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