RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RWDD3Q9Y3V2 267 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 SLC4A7Q9Y6M7 1214 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 DOCK8Q8NF50 2099 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 MUC22E2RYF6 1773 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 IGLV3-10A0A075B6K4 115 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 LCHNA4D1U4 455 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF840PA6NDX5 716 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ERI2A8K979 691 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 POC1B-GALNT4F8VUJ3 575 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ACSL4O60488 711 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 TCEA3O75764 348 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 OAS1P00973 400 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 C8AP07357 584 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CNPP09543 421 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 MBL2P11226 248 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 MLNP12872 115 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CCNCP24863 283 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 SSTR1P30872 391 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CORO1AP31146 461 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 MAGEA3P43357 314 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PPP3CCP48454 512 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 MAPKAPK2P49137 400 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 SLC11A2P49281 568 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 HARS2P49590 506 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 KCNQ1P51787 676 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 NDST2P52849 883 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 EMP3P54852 163 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 GPX6P59796 221 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 GNGT1P63211 74 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PRPSAP1Q14558 356 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PARP6Q2NL67 630 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ALFQ53S48 1182 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 RABGAP1LQ5R372 815 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 AFMIDQ63HM1 303 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 NADSYN1Q6IA69 706 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ARHGAP36Q6ZRI8 547 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CCDC149Q6ZUS6 474 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PID1Q7Z2X4 250 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 TMC7Q7Z402 723 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CAND1Q86VP6 1230 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PALM2Q8IXS6 379 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF683Q8IZ20 524 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 LGI2Q8N0V4 545 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ELMOD1Q8N336 334 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF276Q8N554 614 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 FBF1Q8TES7 1133 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 HERVK_113Q902F9 699 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PSMG2Q969U7 264 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 AGAP3Q96P47 875 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PAFAH2Q99487 392 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PRMT1Q99873 361 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 TCF25Q9BQ70 676 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 EMILIN2Q9BXX0 1053 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CAPS2Q9BXY5 557 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 SLC39A8Q9C0K1 460 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ACSS3Q9H6R3 686 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 CNOT10Q9H9A5 744 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 RXFP1Q9HBX9 757 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF334Q9HCZ1 680 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 NDFIP2Q9NV92 336 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PSD3Q9NYI0 1048 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 ZC3H7BQ9UGR2 993 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 TBK1Q9UHD2 729 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 SLC24A2Q9UI40 661 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 MAD1L1Q9Y6D9 718 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 TEX264Q9Y6I9 313 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 PLXNB3Q9ULL4 1909 aa8.26□□□□□ -1.09
PDZRN3-212ENST00000498048 C2orf78A6NCI8 922 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 RASA4BC9J798 803 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 ZBTB24O43167 697 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 RASA4O43374 803 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 TGM5O43548 720 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LPXNO60711 386 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 RAMP2O60895 175 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 SHOX2O60902 331 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 AVILO75366 819 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 STC2O76061 302 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 CNTN5O94779 1100 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 AP2A1O95782 977 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 GLUD1P00367 558 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 HLA-DQB2P05538 268 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 GSTA2P09210 222 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 PAPOLAP51003 745 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 MLLT6P55198 1093 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 GEMIN4P57678 1058 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 SESN2P58004 480 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 PARP15Q460N3 678 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 TEX44Q53QW1 395 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 FAM133BQ5BKY9 247 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 ARTNQ5T4W7 220 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 FBXL22Q6P050 247 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 CASC4Q6P4E1 433 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LRRC8BQ6P9F7 803 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LEKR1Q6ZMV7 388 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 TDRPQ86YL5 185 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 UMODL1-AS1Q8N2C9 162 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 AGGF1Q8N302 714 aaeCLIP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 GSDMBQ8TAX9 411 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 NSMCE1Q8WV22 266 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms