RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ABCB8Q9NUT2 735 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 DNAI1Q9UI46 699 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 CDV3Q9UKY7 258 aaKnown RBP20.57■□□□□ 0.88
CTSD-206ENST00000497544 TBC1D30Q9Y2I9 924 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 SLC27A6Q9Y2P4 619 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 WASH4PA8MWX3 477 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 TRIM24O15164 1050 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 SP9P0CG40 484 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 PABPC1P11940 636 aaKnown RBP20.56■□□□□ 0.88
CTSD-206ENST00000497544 GRIA2P42262 883 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 MARCKSL1P49006 195 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 PEX5P50542 639 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 DNA2P51530 1060 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 LMAN2Q12907 356 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 SLC12A1Q13621 1099 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 RPS6KA1Q15418 735 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 ANKRD20A8PQ5CZ79 823 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 FSCBQ5H9T9 825 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 MEI1Q5TIA1 1274 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 NLRP14Q86W24 1093 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 CCDC50Q8IVM0 306 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 TSC1Q92574 1164 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 HES6Q96HZ4 224 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 NELL2Q99435 816 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 FBRSL1Q9HCM7 1045 aaKnown RBP20.56■□□□□ 0.88
CTSD-206ENST00000497544 NDRG2Q9UN36 371 aaKnown RBP20.56■□□□□ 0.88
CTSD-206ENST00000497544 NEU3Q9UQ49 428 aa20.56■□□□□ 0.88
CTSD-206ENST00000497544 CACNA1IQ9P0X4 2223 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 ATG2BQ96BY7 2078 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 KAT7O95251 611 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 DRD1P21728 446 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 IL4RP24394 825 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 HLA-FP30511 346 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 CD70P32970 193 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 DPYSQ14117 519 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 TMEM196Q5HYL7 178 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 RNF219Q5W0B1 726 aaPredicted RBP20.55■□□□□ 0.88
CTSD-206ENST00000497544 CXorf57Q6NSI4 855 aaKnown RBP20.55■□□□□ 0.88
CTSD-206ENST00000497544 VSIG1Q86XK7 387 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 SLC35F6Q8N357 371 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 TERB1Q8NA31 727 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.55■□□□□ 0.88
CTSD-206ENST00000497544 WFIKKN2Q8TEU8 576 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 RNF157Q96PX1 679 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 MUC3BQ9H195 1237 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 GGA2Q9UJY4 613 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 ZKSCAN5Q9Y2L8 839 aa20.55■□□□□ 0.88
CTSD-206ENST00000497544 MYO18AQ92614 2054 aaKnown RBP20.55■□□□□ 0.88
CTSD-206ENST00000497544 KANSL1LA0AUZ9 987 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 ILVBLA1L0T0 632 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 C3orf70A6NLC5 250 aaPredicted RBP20.54■□□□□ 0.88
CTSD-206ENST00000497544 ZNF487B1APH4 448 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 DDX3YO15523 660 aaKnown RBP20.54■□□□□ 0.88
CTSD-206ENST00000497544 CSKP41240 450 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 DMC1Q14565 340 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 UBXN2BQ14CS0 331 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 GEN1Q17RS7 908 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 TMCO3Q6UWJ1 677 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 MFSD7Q6UXD7 560 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 SPOCD1Q6ZMY3 1216 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 ANKS1BQ7Z6G8 1248 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 RFX6Q8HWS3 928 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 AHI1Q8N157 1196 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 C17orf53Q8N3J3 647 aaPredicted RBP20.54■□□□□ 0.88
CTSD-206ENST00000497544 RTKNQ9BST9 563 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 TBC1D17Q9HA65 648 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 NDFIP2Q9NV92 336 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 ZNF212Q9UDV6 495 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 JRKLQ9Y4A0 524 aa20.54■□□□□ 0.88
CTSD-206ENST00000497544 A0A0A0MRY4 1105 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 SHISA7A6NL88 538 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 TIMM44O43615 452 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 RAMP2O60895 175 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 POLR2EP19388 210 aaKnown RBP20.53■□□□□ 0.88
CTSD-206ENST00000497544 MZF1P28698 734 aaPredicted RBP20.53■□□□□ 0.88
CTSD-206ENST00000497544 ETFBP38117 255 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 TNFRSF4P43489 277 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 PLK1P53350 603 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 COPS2P61201 443 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 GNG11P61952 73 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 GNA12Q03113 381 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 MESP2Q0VG99 397 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 POLD3Q15054 466 aaPredicted RBP20.53■□□□□ 0.88
CTSD-206ENST00000497544 TFDP3Q5H9I0 405 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 FSTL4Q6MZW2 842 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 ZNF783Q6ZMS7 281 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 KIAA0907Q7Z7F0 614 aaPredicted RBP20.53■□□□□ 0.88
CTSD-206ENST00000497544 PHTF2Q8N3S3 785 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 LZTR1Q8N653 840 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.53■□□□□ 0.88
CTSD-206ENST00000497544 OR52K2Q8NGK3 314 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 PCDH19Q8TAB3 1148 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 UCMAQ8WVF2 138 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 ALG3Q92685 438 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 FAF2Q96CS3 445 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 FEM1AQ9BSK4 669 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 MAGEH1Q9H213 219 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 PRDM16Q9HAZ2 1276 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 NCDNQ9UBB6 729 aa20.53■□□□□ 0.88
CTSD-206ENST00000497544 SETXQ7Z333 2677 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms