RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ACVRL1P37023 503 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 CSKP41240 450 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 PAPOLAP51003 745 aaKnown RBP18.71■□□□□ 0.59
RGP1-202ENST00000496906 OXCT1P55809 520 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 ARHGAP36Q6ZRI8 547 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 ZC3H18Q86VM9 953 aaKnown RBP18.71■□□□□ 0.59
RGP1-202ENST00000496906 ATPAF2Q8N5M1 289 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 OR7D4Q8NG98 312 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 ATXN2LQ8WWM7 1075 aaKnown RBP18.71■□□□□ 0.59
RGP1-202ENST00000496906 NKD2Q969F2 451 aaPredicted RBP18.71■□□□□ 0.59
RGP1-202ENST00000496906 HDAC11Q96DB2 347 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 CHFRQ96EP1 664 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 ALG14Q96F25 216 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 MUC3BQ9H195 1237 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 ABCB8Q9NUT2 735 aa18.71■□□□□ 0.59
RGP1-202ENST00000496906 DNAJC17Q9NVM6 304 aaKnown RBP18.71■□□□□ 0.59
RGP1-202ENST00000496906 TULP3O75386 442 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 MZF1P28698 734 aaPredicted RBP18.7■□□□□ 0.58
RGP1-202ENST00000496906 ETFBP38117 255 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 C2orf54Q08AI8 447 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 SERINC3Q13530 473 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 SLC12A1Q13621 1099 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 BYSLQ13895 437 aaKnown RBP18.7■□□□□ 0.58
RGP1-202ENST00000496906 OASLQ15646 514 aaKnown RBP18.7■□□□□ 0.58
RGP1-202ENST00000496906 LRRC49Q8IUZ0 686 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.7■□□□□ 0.58
RGP1-202ENST00000496906 CEP112Q8N8E3 955 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 MNS1Q8NEH6 495 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 CSGALNACT1Q8TDX6 532 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 LRRN4Q8WUT4 740 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 MAGOHBQ96A72 148 aaKnown RBP18.7■□□□□ 0.58
RGP1-202ENST00000496906 QKIQ96PU8 341 aaKnown RBP eCLIP18.7■□□□□ 0.58
RGP1-202ENST00000496906 LGMNQ99538 433 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 FEM1AQ9BSK4 669 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 CARD6Q9BX69 1037 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 ACE2Q9BYF1 805 aaPredicted RBP18.7■□□□□ 0.58
RGP1-202ENST00000496906 BRD8Q9H0E9 1235 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 CHD5Q8TDI0 1954 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 NUP205Q92621 2012 aa18.7■□□□□ 0.58
RGP1-202ENST00000496906 C19orf67A6NJJ6 358 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 HACD1B0YJ81 288 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 H7C0C1 242 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 TRIM24O15164 1050 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 MAFKO60675 156 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 CISD3P0C7P0 127 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 OPRD1P41143 372 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 ATP5OP48047 213 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 DGKGP49619 791 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 PPIDQ08752 370 aaKnown RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 TDGQ13569 410 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 SNX1Q13596 522 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 PRKD1Q15139 912 aaPredicted RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 PLEKHG6Q3KR16 790 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 TTC27Q6P3X3 843 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 KIAA0907Q7Z7F0 614 aaPredicted RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 TFB1MQ8WVM0 346 aaKnown RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 DNASE1L2Q92874 299 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 DDX47Q9H0S4 455 aaKnown RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 ATP13A1Q9HD20 1204 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 IPO11Q9UI26 975 aaKnown RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 GGA2Q9UJY4 613 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 INTS6Q9UL03 887 aaKnown RBP18.69■□□□□ 0.58
RGP1-202ENST00000496906 SLC27A6Q9Y2P4 619 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 COL4A2P08572 1712 aa18.69■□□□□ 0.58
RGP1-202ENST00000496906 CTAGE15A4D2H0 777 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 NARSO43776 548 aaKnown RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 CTAGE8P0CG41 777 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 PABPC1P11940 636 aaKnown RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 CHRNA3P32297 505 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 COILP38432 576 aaPredicted RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 EIF2DP41214 584 aaKnown RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 SLC6A11P48066 632 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 FNTAP49354 379 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 NUMBP49757 651 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 PLK1P53350 603 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 ZNF33AQ06730 810 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 SLC45A4Q5BKX6 768 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 IL31Q6EBC2 164 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 B4GALNT4Q76KP1 1039 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 CTAGE6Q86UF2 777 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 CDKL3Q8IVW4 592 aaPredicted RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 CTAGE4Q8IX94 777 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 APCDD1Q8J025 514 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 DCAF4L2Q8NA75 395 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 CCNYQ8ND76 341 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 TSGA13Q96PP4 275 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 C10orf88Q9H8K7 445 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 VPS28Q9UK41 221 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 TCF20Q9UGU0 1960 aaKnown RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 NYNRINQ9P2P1 1898 aaKnown RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 BCLAF3A2AJT9 711 aaKnown RBP18.68■□□□□ 0.58
RGP1-202ENST00000496906 SRFP11831 508 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 BMP1P13497 986 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 VAV1P15498 845 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 KCNJ1P48048 391 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 SOX9P48436 509 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 AP1B1Q10567 949 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 FUT11Q495W5 492 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 PITRM1Q5JRX3 1037 aa18.68■□□□□ 0.58
RGP1-202ENST00000496906 NAIF1Q69YI7 327 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms