RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 MEX3CQ5U5Q3 659 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 USP43Q70EL4 1123 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 LAS2Q8IYD9 372 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D22AQ8WUA7 517 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 ZUFSPQ96AP4 578 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 DAZAP1Q96EP5 407 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 FAM118BQ9BPY3 351 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 GATA5Q9BWX5 397 aaPredicted RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 HDHD5Q9BXW7 423 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 PAIP1Q9H074 479 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 FOXP1Q9H334 677 aaPredicted RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 PDE11AQ9HCR9 933 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 SNX15Q9NRS6 342 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 SLC22A11Q9NSA0 550 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 HDAC6Q9UBN7 1215 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 SLC13A4Q9UKG4 626 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 TCRBV5S1A1TA0A578 114 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 FAM90A7PA6NKC0 464 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 FAM90A22PA8MWA6 464 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 FAM90A12PA8MX19 464 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 FAM90A23PA8MXZ1 464 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 PEX12O00623 359 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 EXOC3O60645 756 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 OAZ2O95190 189 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 XBP1P17861 261 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 CAPN3P20807 821 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 PRPH2P23942 346 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 DUSP1P28562 367 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 GGT5P36269 586 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 PNPLA4P41247 253 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 MCM2P49736 904 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 VAMP2P63027 116 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 SETQ01105 290 aaPredicted RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 CFHR3Q02985 330 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 CDK18Q07002 472 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 SLC14A1Q13336 389 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 MFSD13AQ14CX5 517 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 ANKRD1Q15327 319 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 WDR45BQ5MNZ6 344 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 CBWD5Q5RIA9 395 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 ANO7Q6IWH7 933 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 WDR93Q6P2C0 686 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 RTL10Q7L3V2 364 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 RSRC2Q7L4I2 434 aaKnown RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 PIP4P1Q86T03 277 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 NME8Q8N427 588 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 FSIP1Q8NA03 581 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 TERB1Q8NA31 727 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 ZBTB8BQ8NAP8 495 aaPredicted RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 LSM14AQ8ND56 463 aaKnown RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 AKAP1Q92667 903 aaKnown RBP eCLIP4.12□□□□□ -1.75
CLK1-214ENST00000496205 LYZL4Q96KX0 146 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 GPR78Q96P69 363 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 PIGSQ96S52 555 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 NPAS1Q99742 590 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 LBHD1Q9BQE6 289 aaPredicted RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 CLSTN3Q9BQT9 956 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 CINPQ9BW66 212 aaPredicted RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 USP44Q9H0E7 712 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 OSBPL5Q9H0X9 879 aaPredicted RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 STN1Q9H668 368 aaKnown RBP4.12□□□□□ -1.75
CLK1-214ENST00000496205 ACAD9Q9H845 621 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 NOD2Q9HC29 1040 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 ZDHHC7Q9NXF8 308 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 SWAP70Q9UH65 585 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 ZNF112Q9UJU3 913 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 PROCRQ9UNN8 238 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 TMEM98Q9Y2Y6 226 aa4.12□□□□□ -1.75
CLK1-214ENST00000496205 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
CLK1-214ENST00000496205 CLIC1O00299 241 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 SMAD6O43541 496 aaKnown RBP4.11□□□□□ -1.75
CLK1-214ENST00000496205 RFPL3SP0C7P2 107 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 ARSAP15289 507 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 CD72P21854 359 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 MATN1P21941 496 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 BDNFP23560 247 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 ABCD3P28288 659 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 ELF1P32519 619 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 IDUAP35475 653 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 DDIT3P35638 169 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.11□□□□□ -1.75
CLK1-214ENST00000496205 THOC5Q13769 683 aaKnown RBP4.11□□□□□ -1.75
CLK1-214ENST00000496205 CBFBQ13951 182 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 SEMA3AQ14563 771 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 SEC23BQ15437 767 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 KRTAP27-1Q3LI81 207 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 SH2D4BQ5SQS7 431 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 Q6ZTC4 211 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 H1FNTQ75WM6 255 aaPredicted RBP4.11□□□□□ -1.75
CLK1-214ENST00000496205 RNF144BQ7Z419 303 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 TFAP2DQ7Z6R9 452 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 PCGF5Q86SE9 256 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 USP38Q8NB14 1042 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 RNFT2Q96EX2 444 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 MASTLQ96GX5 879 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 CTDSP1Q9GZU7 261 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 MLXIPLQ9NP71 852 aa4.11□□□□□ -1.75
CLK1-214ENST00000496205 BAG5Q9UL15 447 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms