RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 RLN3Q8WXF3 142 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 SIPA1Q96FS4 1042 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 MYO19Q96H55 970 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 MKRN2Q9H000 416 aaKnown RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 RAB6CQ9H0N0 254 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 PRSS16Q9NQE7 514 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 ZNHIT6Q9NWK9 470 aaKnown RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 ARHGAP20Q9P2F6 1191 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 VPS28Q9UK41 221 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 INVSQ9Y283 1065 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 SNX10Q9Y5X0 201 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF292O60281 2723 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 A0A087X0T9 212 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 CXorf51AA0A1B0GTR3 108 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 ILVBLA1L0T0 632 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 EIF3CLB5ME19 914 aaKnown RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 EPN2O95208 641 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 IGLV3-19P01714 112 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 PLEKP08567 350 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 FAM228BP0C875 321 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 HLA-EP13747 358 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 RHOQP17081 205 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 OXTRP30559 389 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 OR1E1P30953 314 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 L1CAMP32004 1257 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 COPAP53621 1224 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 ACAP1Q15027 740 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 SCYL2Q6P3W7 929 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 ALKBH5Q6P6C2 394 aaKnown RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 CCDC185Q8N715 623 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 OR52K2Q8NGK3 314 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF653Q96CK0 615 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 EIF3CQ99613 913 aaKnown RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 TRIM5Q9C035 493 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 MUC3BQ9H195 1237 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 MPP6Q9NZW5 540 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF212Q9UDV6 495 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-233ENST00000495899 DMDP11532 3685 aa12.7□□□□□ -0.38
MRPL55-233ENST00000495899 IGHV1OR15-9A0A0B4J2B8 117 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 EDDM13A0A1B0GTR0 161 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 SSU72P8A0A1W2PR75 194 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 AP5Z1O43299 807 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 RNASEH1O60930 286 aaKnown RBP12.69□□□□□ -0.38
MRPL55-233ENST00000495899 RNF8O76064 485 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 RHOCP08134 193 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 ACADMP11310 421 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 BCKDHBP21953 392 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 TGM1P22735 817 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 PSMA2P25787 234 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 HTR7P34969 479 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 ETFBP38117 255 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 DPP6P42658 865 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 CTSOP43234 321 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-233ENST00000495899 MAPKAPK2P49137 400 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 OGDHQ02218 1023 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 SFSWAPQ12872 951 aaKnown RBP12.69□□□□□ -0.38
MRPL55-233ENST00000495899 CSRP2Q16527 193 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 EFHC2Q5JST6 749 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 C9orf64Q5T6V5 341 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 KIAA1324Q6UXG2 1013 aaKnown RBP12.69□□□□□ -0.38
MRPL55-233ENST00000495899 TFAP2DQ7Z6R9 452 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 CNGA4Q8IV77 575 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 RPL10LQ96L21 214 aaKnown RBP12.69□□□□□ -0.38
MRPL55-233ENST00000495899 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-233ENST00000495899 SLC25A13Q9UJS0 675 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 FZD10Q9ULW2 581 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 SCML1Q9UN30 329 aa12.69□□□□□ -0.38
MRPL55-233ENST00000495899 ATG2BQ96BY7 2078 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 BCLAF3A2AJT9 711 aaKnown RBP12.68□□□□□ -0.38
MRPL55-233ENST00000495899 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 FAM72CH0Y354 149 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 ATP9BO43861 1147 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 MFAP3LO75121 409 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 LRIG2O94898 1065 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 CYP1A2P05177 515 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 CD6P30203 668 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
MRPL55-233ENST00000495899 TPMTP51580 245 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 SLC20A2Q08357 652 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 SPEM2Q0P670 501 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 TBX2Q13207 712 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-233ENST00000495899 SLC18A3Q16572 532 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 PLA2G2CQ5R387 149 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 CCDC122Q5T0U0 273 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 FAM72AQ5TYM5 149 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 FAM72DQ6L9T8 149 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 RWDD4Q6NW29 188 aaKnown RBP12.68□□□□□ -0.38
MRPL55-233ENST00000495899 NLRP14Q86W24 1093 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 FAM72BQ86X60 149 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 PSTKQ8IV42 348 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms