RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 WFDC5Q8TCV5 224 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 DEPDC1BQ8WUY9 529 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 UBXN4Q92575 508 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 FGF14Q92915 247 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 ARHGEF2Q92974 986 aaKnown RBP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 ATP2A3Q93084 1043 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 RTP4Q96DX8 246 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 TSGA13Q96PP4 275 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 KXD1Q9BQD3 176 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 RHOXF2Q9BQY4 288 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 TRIM51Q9BSJ1 452 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 BBS2Q9BXC9 721 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 MAGEH1Q9H213 219 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 USP29Q9HBJ7 922 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 PLK2Q9NYY3 685 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 NEU2Q9Y3R4 380 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 A0A0D9SEW6 157 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ANHXE9PGG2 379 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 NEDD8-MDP1E9PL57 170 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 KCNN4O15554 427 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 HOXC11O43248 304 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-231ENST00000494043 HEXIM1O94992 359 aaKnown RBP11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ADH1CP00326 375 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ADH5P11766 374 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 TYRP14679 529 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ARSAP15289 507 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 PSMC3P17980 439 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 SP100P23497 879 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-231ENST00000494043 CCNCP24863 283 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 STIP1P31948 543 aaKnown RBP11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ACVRL1P37023 503 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ETFBP38117 255 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 GDF10P55107 478 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 OXCT1P55809 520 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 SLC7A5Q01650 507 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 SERINC3Q13530 473 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 PTK6Q13882 451 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 GRM2Q14416 872 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ERCC6LQ2NKX8 1250 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ANO4Q32M45 955 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 LEXMQ3ZCV2 418 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 FSCBQ5H9T9 825 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 RHBDF2Q6PJF5 856 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ARHGAP36Q6ZRI8 547 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC117Q8IWD4 279 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-231ENST00000494043 YAF2Q8IY57 180 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC13Q8IYE1 715 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 FIBINQ8TAL6 211 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 HTR3CQ8WXA8 447 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 ZFYVE19Q96K21 471 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 FERMT1Q9BQL6 677 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 PLA2G2FQ9BZM2 168 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 PCDH9Q9HC56 1237 aa11.67□□□□□ -0.54
MCF2L-231ENST00000494043 IPO11Q9UI26 975 aaKnown RBP11.67□□□□□ -0.54
MCF2L-231ENST00000494043 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 TARSL2A2RTX5 802 aaKnown RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 C2CD4DB7Z1M9 353 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 RNF103O00237 685 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 CTIFO43310 598 aaKnown RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 MTSS1O43312 755 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 MAFKO60675 156 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 STK10O94804 968 aaKnown RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 IFNB1P01574 187 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 KRT14P02533 472 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 CLCN6P51797 869 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 GAD2Q05329 585 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 LMAN2Q12907 356 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 KCTD19Q17RG1 926 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 RNF219Q5W0B1 726 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 TIGD7Q6NT04 549 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF354CQ86Y25 554 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF557Q8N988 423 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC89Q8N998 374 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 GLIS1Q8NBF1 620 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 OR7D4Q8NG98 312 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 CCHCR1Q8TD31 782 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 FATE1Q969F0 183 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 LMLNQ96KR4 655 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 ERP44Q9BS26 406 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 PHF7Q9BWX1 381 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 ACE2Q9BYF1 805 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 RAB17Q9H0T7 212 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 MUC3BQ9H195 1237 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 EBF3Q9H4W6 596 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 HPS4Q9NQG7 708 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 SEPT10Q9P0V9 454 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 KIAA1522Q9P206 1035 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 DMGDHQ9UI17 866 aaKnown RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 NUMBLQ9Y6R0 609 aa11.66□□□□□ -0.54
MCF2L-231ENST00000494043 NYNRINQ9P2P1 1898 aaKnown RBP11.66□□□□□ -0.54
MCF2L-231ENST00000494043 A0A0A0MRY4 1105 aa11.65□□□□□ -0.54
MCF2L-231ENST00000494043 C5orf60A6NFR6 353 aa11.65□□□□□ -0.54
MCF2L-231ENST00000494043 ZSCAN5CA6NGD5 496 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms