RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 YTHDF3Q7Z739 585 aaKnown RBP10.89□□□□□ -0.67
CLCN6-208ENST00000494028 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 CCNJLQ8IV13 435 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 UNC5BQ8IZJ1 945 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 ATP6V0D2Q8N8Y2 350 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF669Q96BR6 464 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-208ENST00000494028 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 NAT9Q9BTE0 207 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 LRRC40Q9H9A6 602 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 TMEM248Q9NWD8 314 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 MPP6Q9NZW5 540 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SAMD15Q9P1V8 674 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SLC17A7Q9P2U7 560 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF212Q9UDV6 495 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 BACE2Q9Y5Z0 518 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SLC12A8A0AV02 714 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 HMX2A2RU54 273 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ANKRD65E5RJM6 399 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 TBX18O95935 607 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 JCHAINP01591 159 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 MT-ND3P03897 115 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 SNRPAP09012 282 aaKnown RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 DHRS4L1P0CG22 281 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 RPL17P18621 184 aaKnown RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CCNCP24863 283 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 GBP2P32456 591 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 RFC2P35250 354 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ETV4P43268 484 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CENPFP49454 3210 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 SERPINB9P50453 376 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 TUBP50607 506 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 MLLT6P55198 1093 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 RING1Q06587 406 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 DUSP4Q13115 394 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 FRG1Q14331 258 aaKnown RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ALFQ53S48 1182 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 C10orf120Q5SQS8 335 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 NADSYN1Q6IA69 706 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 TIGD7Q6NT04 549 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CASC4Q6P4E1 433 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF449Q6P9G9 518 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 PACS1Q6VY07 963 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CYS1Q717R9 158 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 MIB1Q86YT6 1006 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 SLC39A11Q8N1S5 342 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 UMODL1-AS1Q8N2C9 162 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 TCP10LQ8TDR4 215 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 TTC17Q96AE7 1141 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ARMC5Q96C12 935 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 MTBPQ96DY7 904 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CERS2Q96G23 380 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 IGSF21Q96ID5 467 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF333Q96JL9 665 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 BTN2A3PQ96KV6 586 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 C1orf74Q96LT6 269 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CEP295NLQ96MC4 621 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 FCRL5Q96RD9 977 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ELAC2Q9BQ52 826 aaKnown RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 APOL2Q9BQE5 337 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ZYG11BQ9C0D3 744 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 CCSER2Q9H7U1 834 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 GLOD4Q9HC38 313 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 MARCH2Q9P0N8 246 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 PPARGC1AQ9UBK2 798 aaKnown RBP10.88□□□□□ -0.67
CLCN6-208ENST00000494028 VANGL2Q9ULK5 521 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 ATP11BQ9Y2G3 1177 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 YIPF1Q9Y548 306 aa10.88□□□□□ -0.67
CLCN6-208ENST00000494028 GOLGA6L7A0A1B0GV03 622 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 MYO1CO00159 1063 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 MATN3O15232 486 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 TLR5O60602 858 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 LPXNO60711 386 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 RFPL1O75677 317 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 KRT37O76014 449 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 CNTN5O94779 1100 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 UPP2O95045 317 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 PEX11BO96011 259 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 CLTBP09497 229 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 PYGBP11216 843 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 PAPOLAP51003 745 aaKnown RBP10.87□□□□□ -0.67
CLCN6-208ENST00000494028 DEFB103AP81534 67 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 MGAT5Q09328 741 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 IFT88Q13099 833 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 DNAJC3Q13217 504 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 PRPSAP1Q14558 356 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 USP41Q3LFD5 358 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 HHATQ5VTY9 493 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 NAPEPLDQ6IQ20 393 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 FAM47EQ6ZV65 393 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 SPATA21Q7Z572 469 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 TFAP2DQ7Z6R9 452 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 CHSY1Q86X52 802 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 CIR1Q86X95 450 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms