RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TPRG1Q6ZUI0 275 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 TP53INP2Q8IXH6 220 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 ETFBKMTQ8IXQ9 262 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 OR7D4Q8NG98 312 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 COG1Q8WTW3 980 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 MS4A14Q96JA4 679 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 PNKPQ96T60 521 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 SLC2A11Q9BYW1 496 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 C8orf33Q9H7E9 229 aaPredicted RBP17.63■□□□□ 0.41
LIME1-208ENST00000493265 KIAA1522Q9P206 1035 aaPredicted RBP17.63■□□□□ 0.41
LIME1-208ENST00000493265 SAE1Q9UBE0 346 aaPredicted RBP17.63■□□□□ 0.41
LIME1-208ENST00000493265 ZNF212Q9UDV6 495 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 GGA2Q9UJY4 613 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 COL4A2P08572 1712 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 A0A0D9SEW6 157 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 WASH4PA8MWX3 477 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 ESPNB1AK53 854 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 ZNF185O15231 689 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 MFSD11O43934 449 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 RAMP2O60895 175 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 CD72P21854 359 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 ACVRL1P37023 503 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 GALK1P51570 392 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 GNA12Q03113 381 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 GBE1Q04446 702 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 POLD3Q15054 466 aaPredicted RBP17.62■□□□□ 0.41
LIME1-208ENST00000493265 PON2Q15165 354 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
LIME1-208ENST00000493265 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 TXNDC11Q6PKC3 985 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 SETD3Q86TU7 594 aaPredicted RBP17.62■□□□□ 0.41
LIME1-208ENST00000493265 RALGPS2Q86X27 583 aaPredicted RBP17.62■□□□□ 0.41
LIME1-208ENST00000493265 VSIG1Q86XK7 387 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 APCDD1Q8J025 514 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 PLD5Q8N7P1 536 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 DTWD2Q8NBA8 298 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 PBKQ96KB5 322 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 P2RY13Q9BPV8 354 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 FAM118BQ9BPY3 351 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 SLC39A8Q9C0K1 460 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 NOL6Q9H6R4 1146 aaKnown RBP17.62■□□□□ 0.41
LIME1-208ENST00000493265 DONSONQ9NYP3 566 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 SMARCAL1Q9NZC9 954 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 VPS28Q9UK41 221 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 DOCK4Q8N1I0 1966 aa17.62■□□□□ 0.41
LIME1-208ENST00000493265 MIA3Q5JRA6 1907 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 TCRBV7S2A1N4TA0A589 114 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 ILVBLA1L0T0 632 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
LIME1-208ENST00000493265 RASA4BC9J798 803 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 RASA4O43374 803 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 TJP3O95049 919 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 CISD3P0C7P0 127 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 PABPC1P11940 636 aaKnown RBP17.61■□□□□ 0.41
LIME1-208ENST00000493265 ZFXP17010 805 aaPredicted RBP17.61■□□□□ 0.41
LIME1-208ENST00000493265 SERPINB6P35237 376 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 GEN1Q17RS7 908 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 LONRF2Q1L5Z9 754 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 PAPD7Q5XG87 772 aaKnown RBP17.61■□□□□ 0.41
LIME1-208ENST00000493265 RNF43Q68DV7 783 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 SLC9A4Q6AI14 798 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 BBS12Q6ZW61 710 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 SFTPA1Q8IWL2 248 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 UMODL1-AS1Q8N2C9 162 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 ZNF557Q8N988 423 aaPredicted RBP17.61■□□□□ 0.41
LIME1-208ENST00000493265 LRRN4Q8WUT4 740 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 HMCESQ96FZ2 354 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 KLC2Q9H0B6 622 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 FBRSL1Q9HCM7 1045 aaKnown RBP17.61■□□□□ 0.41
LIME1-208ENST00000493265 ARHGEF3Q9NR81 526 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 SAR1BQ9Y6B6 198 aa17.61■□□□□ 0.41
LIME1-208ENST00000493265 GVINP1Q7Z2Y8 2422 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 KRBA1A5PL33 1030 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 TBC1D3BA6NDS4 549 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 KIF2AO00139 706 aaPredicted RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 KAT7O95251 611 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 FGGP02679 453 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 APODP05090 189 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 PECAM1P16284 738 aaPredicted RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 TCP1P17987 556 aaKnown RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 PTPN7P35236 360 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 OXCT1P55809 520 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 PAFAH1B3Q15102 231 aaKnown RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 FUT11Q495W5 492 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 PITRM1Q5JRX3 1037 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 LEKR1Q6ZMV7 388 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 B4GALNT4Q76KP1 1039 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 SLC13A5Q86YT5 568 aaPredicted RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 ARHGAP12Q8IWW6 846 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 LZTR1Q8N653 840 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 FAM3CQ92520 227 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 FEM1AQ9BSK4 669 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 CIPCQ9C0C6 399 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 RETREG1Q9H6L5 497 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 ATP13A1Q9HD20 1204 aa17.6■□□□□ 0.41
LIME1-208ENST00000493265 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms