RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CXCR3P49682 368 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 PITX1P78337 314 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 APBA1Q02410 837 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 OVGP1Q12889 678 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 RAPGEF1Q13905 1077 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 KCNJ12Q14500 433 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 DRAP1Q14919 205 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 SLC25A52Q3SY17 297 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 PTPN20Q4JDL3 420 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 KLHDC7AQ5VTJ3 777 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 CXorf57Q6NSI4 855 aaKnown RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ARCQ7LC44 396 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 SETD3Q86TU7 594 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 OXR1Q8N573 874 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 BAHD1Q8TBE0 780 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 FRS2Q8WU20 508 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ZCCHC14Q8WYQ9 949 aaKnown RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ORAI3Q9BRQ5 295 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 C2orf49Q9BVC5 232 aaPredicted RBP12.81□□□□□ -0.36
COL6A1-205ENST00000492851 STK33Q9BYT3 514 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 TKTL2Q9H0I9 626 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 SIK2Q9H0K1 926 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 MUC3BQ9H195 1237 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 RETREG1Q9H6L5 497 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 ARHGEF38Q9NXL2 777 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 VPS28Q9UK41 221 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 DMTF1Q9Y222 760 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 DAAM1Q9Y4D1 1078 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 CEP295Q9C0D2 2601 aa12.81□□□□□ -0.36
COL6A1-205ENST00000492851 A0A1B0GTQ1 180 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 UCHL3P15374 230 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 ARRB1P49407 418 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-205ENST00000492851 STK19P49842 368 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-205ENST00000492851 CLCN6P51797 869 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 ADPRHP54922 357 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 RNASE9P60153 205 aaKnown RBP12.8□□□□□ -0.36
COL6A1-205ENST00000492851 DEUP1Q05D60 604 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 DLG2Q15700 870 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 TCP11X2Q5H9J9 407 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 C6orf118Q5T5N4 469 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-205ENST00000492851 CCNI2Q6ZMN8 369 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-205ENST00000492851 IQCHQ86VS3 1027 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 SH2D3CQ8N5H7 860 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 AADATQ8N5Z0 425 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 ALG14Q96F25 216 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 HAPLN3Q96S86 360 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 ELF4Q99607 663 aaPredicted RBP12.8□□□□□ -0.36
COL6A1-205ENST00000492851 ERVMER34-1Q9H9K5 563 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 PLCB1Q9NQ66 1216 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 PIGVQ9NUD9 493 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 SERGEFQ9UGK8 458 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 OR51B4Q9Y5P0 310 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 PI4KAP42356 2102 aa12.8□□□□□ -0.36
COL6A1-205ENST00000492851 MUC22E2RYF6 1773 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 ASCC3Q8N3C0 2202 aaKnown RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 SRRM3A6NNA2 597 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 DRGXA6NNA5 263 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 C10orf142B7Z368 130 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 H0Y8X5 98 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 TLR4O00206 839 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 LATO43561 262 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 RNGTTO60942 597 aaKnown RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 DKK1O94907 266 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 SULT1E1P49888 294 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 KCNMA1Q12791 1236 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 STAT4Q14765 748 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 FAM102AQ5T9C2 384 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 ZNF783Q6ZMS7 281 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 TMPRSS7Q7RTY8 843 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 SLCO6A1Q86UG4 719 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 CIR1Q86X95 450 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 PNPLA1Q8N8W4 532 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 ENOX1Q8TC92 643 aaKnown RBP12.79□□□□□ -0.36
COL6A1-205ENST00000492851 FAM131CQ96AQ9 280 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 SLC6A18Q96N87 628 aa12.79□□□□□ -0.36
COL6A1-205ENST00000492851 GON4LQ3T8J9 2241 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 CACNA1BQ00975 2339 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 CXorf51AA0A1B0GTR3 108 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 KCNK3O14649 394 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 PLRG1O43660 514 aaKnown RBP12.78□□□□□ -0.36
COL6A1-205ENST00000492851 ADCY5O95622 1261 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 ITGAVP06756 1048 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 RHOCP08134 193 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 C1SP09871 688 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 OR1E1P30953 314 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 RECQLP46063 649 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms