RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TEX33O43247 280 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 OPHN1O60890 802 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 RHOCP08134 193 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 KRT3P12035 628 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 SLC8A1P32418 973 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 NUMBP49757 651 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 NOVA1P51513 510 aaKnown RBP27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 KRT83P78385 493 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 ARL13BQ3SXY8 428 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 CCDC14Q49A88 953 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 STK40Q8N2I9 435 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 ZCCHC9Q8N567 271 aaKnown RBP27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 MINDY1Q8N5J2 469 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 FRS2Q8WU20 508 aa27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.85■■■□□ 2.05
SH3GL3-204ENST00000492099 ATP9BO43861 1147 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 ADH1BP00325 375 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 CEACAM1P13688 526 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 PTPN9P43378 593 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 C6orf118Q5T5N4 469 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 N4BP2L1Q5TBK1 243 aaPredicted RBP27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 SH3PXD2AQ5TCZ1 1133 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 STRADAQ7RTN6 431 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 SNX19Q92543 992 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 OMDQ99983 421 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 FUCA2Q9BTY2 467 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 C2orf49Q9BVC5 232 aaPredicted RBP27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 SELENOOQ9BVL4 669 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 FZD4Q9ULV1 537 aa27.84■■■□□ 2.05
SH3GL3-204ENST00000492099 UPK3BL1B0FP48 263 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 UPK3BL2E5RIL1 263 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 SRGAP2O75044 1071 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 C5AR1P21730 350 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 OR1E1P30953 314 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 C1QBPQ07021 282 aaKnown RBP27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 CDO1Q16878 200 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 C15orf59Q2T9L4 293 aaPredicted RBP27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 KLHL40Q2TBA0 621 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 ACCSLQ4AC99 568 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 C3orf20Q8ND61 904 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 C1orf216Q8TAB5 229 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 JOSD2Q8TAC2 188 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 SLC32A1Q9H598 525 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 DNAAF2Q9NVR5 837 aaKnown RBP27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 MPP6Q9NZW5 540 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 ADAMTS1Q9UHI8 967 aa27.83■■■□□ 2.05
SH3GL3-204ENST00000492099 PCDH15Q96QU1 1955 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 A0A1W2PP55 124 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 RNASEH2AO75792 299 aaKnown RBP27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 PSMD8P48556 350 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 GRIK2Q13002 908 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 SEMA3BQ13214 749 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 DLG2Q15700 870 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 MON1BQ7L1V2 547 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 DSG4Q86SJ6 1040 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 SH2D3CQ8N5H7 860 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 CENPIQ92674 756 aaPredicted RBP27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 BIRC7Q96CA5 298 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 ZYG11BQ9C0D3 744 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 NEUROG2Q9H2A3 272 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 OSGEPQ9NPF4 335 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 PPARGC1AQ9UBK2 798 aaKnown RBP27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 SERGEFQ9UGK8 458 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 HS3ST2Q9Y278 367 aa27.82■■■□□ 2.04
SH3GL3-204ENST00000492099 SIGLEC16A6NMB1 481 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 FSBPO95073 299 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 IL1BP01584 269 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 VAV1P15498 845 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 ADRA1BP35368 520 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 ZNF783Q6ZMS7 281 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 IRF2BP2Q7Z5L9 587 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 TFAP2DQ7Z6R9 452 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 OR8D1Q8WZ84 308 aa27.81■■■□□ 2.04
SH3GL3-204ENST00000492099 NUMA1Q14980 2115 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 CACNA1EQ15878 2313 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 A0A1W2PQC6 194 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 ILVBLA1L0T0 632 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 LRRC72A6NJI9 287 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 GJB6O95452 261 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 GOT1P17174 413 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 CD27P26842 260 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 RFC1P35251 1148 aaPredicted RBP27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 AFF3P51826 1226 aaKnown RBP27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 GALCP54803 685 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 NRG1Q02297 640 aaPredicted RBP27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 SLC14A1Q13336 389 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 IQCB1Q15051 598 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 ARTNQ5T4W7 220 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 KIAA0895LQ68EN5 471 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 PPP1R2P3Q6NXS1 205 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 DCAF4L2Q8NA75 395 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 BAP1Q92560 729 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 PSMB7Q99436 277 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 OSBPL2Q9H1P3 480 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 RETREG1Q9H6L5 497 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 OR12D3Q9UGF7 316 aa27.8■■■□□ 2.04
SH3GL3-204ENST00000492099 ASCC3Q8N3C0 2202 aaKnown RBP27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 A0A1B0GTH6 734 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 GIPC1O14908 333 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 ALOX15BO15296 676 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms