RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 POLR3BQ9NW08 1133 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-219ENST00000491747 DONSONQ9NYP3 566 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 HBS1LQ9Y450 684 aaKnown RBP9.69□□□□□ -0.86
BRCA1-219ENST00000491747 CFAP73A6NFT4 308 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 K7EQS6 105 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ADH1CP00326 375 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 IGLV3-25P01717 112 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 UNGP13051 313 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 HADHBP55084 474 aaKnown RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 GAD2Q05329 585 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 EIF4EBP2Q13542 120 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SLC29A2Q14542 456 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ANO4Q32M45 955 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 HIBCHQ6NVY1 386 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 BEND5Q7L4P6 421 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ERICH1Q86X53 443 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 FAM217AQ8IXS0 508 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 BHMTQ93088 406 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 FCRL2Q96LA5 508 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 RUNDC3BQ96NL0 473 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SLC2A13Q96QE2 648 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SYT11Q9BT88 431 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 THAP2Q9H0W7 228 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 KCNH6Q9H252 994 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SEPT11Q9NVA2 429 aaKnown RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SPATA6Q9NWH7 488 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 PLK2Q9NYY3 685 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 PCYOX1Q9UHG3 505 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SLC12A4Q9UP95 1085 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SNX24Q9Y343 169 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 CEP83Q9Y592 693 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 FANCMQ8IYD8 2048 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 NEDD8-MDP1E9PL57 170 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 HOXC11O43248 304 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 LSM8O95777 96 aaKnown RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 TFE3P19532 575 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 TBX4P57082 545 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ELF3P78545 371 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 GRSF1Q12849 480 aaKnown RBP eCLIP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 PTP4A2Q12974 167 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 EFHC1Q5JVL4 640 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 DGKKQ5KSL6 1271 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 FYB2Q5VWT5 728 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 TRNP1Q6NT89 227 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 C11orf63Q6NUN7 778 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 TSSK4Q6SA08 328 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ZDHHC24Q6UX98 284 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 PHLDB2Q86SQ0 1253 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 CCDC63Q8NA47 563 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-219ENST00000491747 C18orf8Q96DM3 657 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 SLC39A13Q96H72 371 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 AGPAT1Q99943 283 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 TMEM109Q9BVC6 243 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 DCLK3Q9C098 648 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 LRRC4CQ9HCJ2 640 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 FAM86C1Q9NVL1 165 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 ASNSD1Q9NWL6 643 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 CLEC4EQ9ULY5 219 aa9.68□□□□□ -0.86
BRCA1-219ENST00000491747 GFRA2O00451 464 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 CAPN9O14815 690 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 TULP3O75386 442 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 ATP6V1G2O95670 118 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 TRUB2O95900 331 aaKnown RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 VIMP08670 466 aaKnown RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 TYRP14679 529 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 DRD1P21728 446 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SGSHP51688 502 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SATB1Q01826 763 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 KDSRQ06136 332 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 LRRC32Q14392 662 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 KCTD19Q17RG1 926 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 DCAF6Q58WW2 860 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 OTUD1Q5VV17 481 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 NADSYN1Q6IA69 706 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SLC26A9Q7LBE3 791 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 TRPM8Q7Z2W7 1104 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 CCHCR1Q8TD31 782 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 ALG3Q92685 438 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 ARHGEF26Q96DR7 871 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 MYEOVQ96EZ4 313 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 PRMT1Q99873 361 aaKnown RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 BBS2Q9BXC9 721 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SYNCQ9H7C4 482 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 MARK1Q9P0L2 795 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 XPO7Q9UIA9 1087 aaKnown RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 STOML2Q9UJZ1 356 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 ZNF510Q9Y2H8 683 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 ALG6Q9Y672 507 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 EML5Q05BV3 1969 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SMIM23A6NLE4 172 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 RASGRF2O14827 1237 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 IRAK2O43187 625 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 TSPAN3O60637 253 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 GJB6O95452 261 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 CISD3P0C7P0 127 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms