RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CSNK1EP49674 416 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 COPB1P53618 953 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 RACK1P63244 317 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TRIP6Q15654 476 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 ST3GAL2Q16842 350 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3GQ6DHY5 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3CQ6IPX1 549 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 CAVIN1Q6NZI2 390 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 ZNF783Q6ZMS7 281 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 PIP4P1Q86T03 277 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D3Q8IZP1 549 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 ATP11CQ8NB49 1132 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 EPS8L1Q8TE68 723 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 NEUROG2Q9H2A3 272 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 RETREG1Q9H6L5 497 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 AASDHPPTQ9NRN7 309 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TM7SF3Q9NS93 570 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 ADAMTS1Q9UHI8 967 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 TBC1D30Q9Y2I9 924 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 PCDHGB2Q9Y5G2 931 aa17.02■□□□□ 0.32
PDLIM2-217ENST00000491330 WDR87Q6ZQQ6 2873 aa17.02■□□□□ 0.31
PDLIM2-217ENST00000491330 A0A1B0GVT2 93 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 FLRT2O43155 660 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 BNIP3LO60238 219 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 SRGAP2O75044 1071 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 CCR5P51681 352 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 CLCN6P51797 869 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 GALCP54803 685 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 TPM4P67936 248 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 NOMO3P69849 1222 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 SLC20A2Q08357 652 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 DLG2Q15700 870 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 HLA-BQ31612 363 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 CIR1Q86X95 450 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 NAXDQ8IW45 347 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 STK40Q8N2I9 435 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 IGSF8Q969P0 613 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 NT5C3BQ969T7 300 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 MYEOVQ96EZ4 313 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 MYO19Q96H55 970 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 TBCBQ99426 244 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 SELENOOQ9BVL4 669 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 TM9SF3Q9HD45 589 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 HPCAL4Q9UM19 191 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 ANKRD6Q9Y2G4 727 aa17.01■□□□□ 0.31
PDLIM2-217ENST00000491330 A0A1W2PPC4 97 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 ADCY5O95622 1261 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 KRT3P12035 628 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 STK19P49842 368 aaPredicted RBP17■□□□□ 0.31
PDLIM2-217ENST00000491330 CCT8P50990 548 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 GEMIN4P57678 1058 aaKnown RBP17■□□□□ 0.31
PDLIM2-217ENST00000491330 CENPCQ03188 943 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 NCAPHQ15003 741 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 C5orf22Q49AR2 442 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 ANO6Q4KMQ2 910 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 NCEH1Q6PIU2 408 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17■□□□□ 0.31
PDLIM2-217ENST00000491330 PTPRN2Q92932 1015 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 PPP1R16AQ96I34 528 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 FAM129BQ96TA1 746 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 SPON2Q9BUD6 331 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 GANQ9H2C0 597 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 MTG2Q9H4K7 406 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 ADAM22Q9P0K1 906 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 NCOR2Q9Y618 2525 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 PLXND1Q9Y4D7 1925 aa17■□□□□ 0.31
PDLIM2-217ENST00000491330 E9PAM4 449 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 MCF2LO15068 1137 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 YKT6O15498 198 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 ATP9BO43861 1147 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 SH3BP5O60239 455 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 PRNPP04156 253 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 CD59P13987 128 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 MMP8P22894 467 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 ZNF165P49910 485 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 ATP11AP98196 1134 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 CXorf57Q6NSI4 855 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 DCAF4L2Q8NA75 395 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 OR2I1PQ8NGU4 316 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 RHBDD1Q8TEB9 315 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 CFAP57Q96MR6 1250 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 METTL5Q9NRN9 209 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 DONSONQ9NYP3 566 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 MYO6Q9UM54 1294 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 SIK3Q9Y2K2 1263 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 NUP205Q92621 2012 aa16.99■□□□□ 0.31
PDLIM2-217ENST00000491330 SPAARA0A1B0GVQ0 90 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 ILVBLA1L0T0 632 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 TMEM8BA6NDV4 472 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 DRGXA6NNA5 263 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 VILLO15195 856 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 CYP1A1P04798 512 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 FERP16591 822 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 FLT3P36888 993 aa16.98■□□□□ 0.31
PDLIM2-217ENST00000491330 ARRB1P49407 418 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms