RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 MNAT1P51948 309 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SOX10P56693 466 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 DYNLL1P63167 89 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GNGT1P63211 74 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TNNC1P63316 161 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 IRX3P78415 501 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MECOMQ03112 1051 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KRT17Q04695 432 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ACTN3Q08043 901 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 BYSLQ13895 437 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 HABP2Q14520 560 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GRM4Q14833 912 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PLCB4Q15147 1175 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC18A3Q16572 532 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TXNRD1Q16881 649 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KIAA0753Q2KHM9 967 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC96Q2M329 555 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TMEM266Q2M3C6 531 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TBC1D25Q3MII6 688 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 LACTB2Q53H82 288 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KHDC1LQ5JSQ8 128 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 HYIQ5T013 277 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM83BQ5T0W9 1011 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FCRLBQ6BAA4 426 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TAF2Q6P1X5 1199 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NAPRTQ6XQN6 538 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KDM7AQ6ZMT4 941 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 C15orf52Q6ZUT6 534 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 RRAGAQ7L523 313 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 HEATR3Q7Z4Q2 680 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 IRF2BP2Q7Z5L9 587 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NECAB2Q7Z6G3 386 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CPLX4Q7Z7G2 160 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SLFN11Q7Z7L1 901 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NEK8Q86SG6 692 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 VPS36Q86VN1 386 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC65Q8IXS2 484 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MYOCDQ8IZQ8 938 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SYCE1Q8N0S2 351 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 DCBLD1Q8N8Z6 715 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MIGA1Q8NAN2 632 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PRPF38AQ8NAV1 312 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 RASSF8Q8NHQ8 419 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 IFI44Q8TCB0 444 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ACTRT1Q8TDG2 376 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 DENND1AQ8TEH3 1009 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 HASPINQ8TF76 798 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NTN5Q8WTR8 489 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SDR42E1Q8WUS8 393 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ATRIPQ8WXE1 791 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 IFT81Q8WYA0 676 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TBC1D5Q92609 795 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 HOXB13Q92826 284 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SCAMP4Q969E2 229 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 RRP36Q96EU6 259 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CDK5RAP3Q96JB5 506 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CABS1Q96KC9 395 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ATP6V1G3Q96LB4 118 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TEKT5Q96M29 485 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MYCBPQ99417 103 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NELL2Q99435 816 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NAP1L3Q99457 506 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NCAPGQ9BPX3 1015 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TMEM47Q9BQJ4 181 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SH2D3AQ9BRG2 576 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TMEM109Q9BVC6 243 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ALG8Q9BVK2 526 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 C1orf43Q9BWL3 253 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SPZ1Q9BXG8 430 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MOV10L1Q9BXT6 1211 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM126AQ9BYI3 521 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 IFIH1Q9BYX4 1025 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ROPN1BQ9BZX4 212 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 AMBRA1Q9C0C7 1298 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 BHMT2Q9H2M3 363 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SMOC2Q9H3U7 446 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TAF1DQ9H5J8 278 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CNOT10Q9H9A5 744 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ACTR5Q9H9F9 607 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ROPN1Q9HAT0 212 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TMBIM4Q9HC24 238 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ALG13Q9NP73 1137 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PLCB1Q9NQ66 1216 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM114A2Q9NRY5 505 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PANK4Q9NVE7 773 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ZSCAN32Q9NX65 697 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MCM9Q9NXL9 1143 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SUCLA2Q9P2R7 463 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ARPP21Q9UBL0 812 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 HDAC6Q9UBN7 1215 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 LRWD1Q9UFC0 647 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CPA4Q9UI42 421 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MAD2L2Q9UI95 211 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SERTAD3Q9UJW9 196 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FBXL5Q9UKA1 691 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 AMFRQ9UKV5 643 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NIP7Q9Y221 180 aaKnown RBP eCLIP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GDAQ9Y2T3 454 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 THRAP3Q9Y2W1 955 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms