RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PLK1P53350 603 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 UBASH3AP57075 661 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 RPS24P62847 133 aaKnown RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 PDCLQ13371 301 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 TAF5Q15542 800 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 DCAF6Q58WW2 860 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 FAM46CQ5VWP2 391 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 OXR1Q8N573 874 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 ZNF366Q8N895 744 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 RNF214Q8ND24 703 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 C1orf131Q8NDD1 294 aaKnown RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 WFDC5Q8TCV5 224 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 RNF34Q969K3 372 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 PPP1R13BQ96KQ4 1090 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 PRICKLE1Q96MT3 831 aaPredicted RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 CPXM1Q96SM3 734 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 NUCKS1Q9H1E3 243 aaKnown RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 NOCTQ9UK39 431 aaKnown RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 FNDC3AQ9Y2H6 1198 aaKnown RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 PKD1L2Q7Z442 2459 aa10.68□□□□□ -0.7
TTC28-207ENST00000490475 GOLGA4Q13439 2230 aaKnown RBP10.68□□□□□ -0.7
TTC28-207ENST00000490475 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 E9PAM4 449 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 ALOX15BO15296 676 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 SIN3BO75182 1162 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 RNASEH2AO75792 299 aaKnown RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 F9P00740 461 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 GOT1P17174 413 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 SLC8A1P32418 973 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 ARRB1P49407 418 aaPredicted RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 TERF1P54274 439 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 GALCP54803 685 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 FAM193AP78312 1265 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 OVGP1Q12889 678 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 KIF19Q2TAC6 998 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 C2CD6Q53TS8 623 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 ZC3H12AQ5D1E8 599 aaKnown RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 C9orf64Q5T6V5 341 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 SYPL2Q5VXT5 272 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 CCNI2Q6ZMN8 369 aaPredicted RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 BAHD1Q8TBE0 780 aaPredicted RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 EPS8L1Q8TE68 723 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 CPA5Q8WXQ8 436 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 BAP1Q92560 729 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 MYO19Q96H55 970 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 MRGPRX3Q96LB0 322 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 CCDC114Q96M63 670 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 CAMK1GQ96NX5 476 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 CCDC86Q9H6F5 360 aaKnown RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 SYNCQ9H7C4 482 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 FAM204AQ9H8W3 233 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 DDIT4Q9NX09 232 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 IFNKQ9P0W0 207 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 SLC25A13Q9UJS0 675 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 INTS6Q9UL03 887 aaKnown RBP10.67□□□□□ -0.7
TTC28-207ENST00000490475 DAAM1Q9Y4D1 1078 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 SNX11Q9Y5W9 270 aa10.67□□□□□ -0.7
TTC28-207ENST00000490475 AKAP13Q12802 2813 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 A0A1W2PP55 124 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 ESPNB1AK53 854 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 C1QTNF3-AMACRE9PGA6 284 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 MID1O15344 667 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 CLDN11O75508 207 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 GRAP2O75791 330 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 ERBB2P04626 1255 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 C1SP09871 688 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 CD38P28907 300 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 NOS2P35228 1153 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 CTSKP43235 329 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 FMO1Q01740 532 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 CDR2Q01850 454 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 BNC1Q01954 994 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 ZNF177Q13360 481 aaPredicted RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 EIF4EBP2Q13542 120 aaPredicted RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 PTPN20Q4JDL3 420 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 BRMS1LQ5PSV4 323 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 RAP1GAP2Q684P5 730 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 OR6B2Q6IFH4 312 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 NCEH1Q6PIU2 408 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 TMPRSS7Q7RTY8 843 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 IRF2BP2Q7Z5L9 587 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 IQCHQ86VS3 1027 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 PROSER1Q86XN7 944 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 MMAAQ8IVH4 418 aaKnown RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 CFAP52Q8N1V2 620 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 TMEM35BQ8NCS4 154 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 MSANTD4Q8NCY6 345 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 OR8D1Q8WZ84 308 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 RPRD1AQ96P16 312 aaPredicted RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 SLC2A13Q96QE2 648 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 PCDHB18PQ96TA0 734 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 ELF4Q99607 663 aaPredicted RBP10.66□□□□□ -0.7
TTC28-207ENST00000490475 NEUROG2Q9H2A3 272 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 IL21RQ9HBE5 538 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms