RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RAD51CO43502 376 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 MAFKO60675 156 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 ADH1CP00326 375 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 TYRP14679 529 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 VAV1P15498 845 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 CCNCP24863 283 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 RBL1P28749 1068 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 ETFBP38117 255 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 PAPOLAP51003 745 aaKnown RBP16.4■□□□□ 0.22
CLDN11-208ENST00000488989 PLK1P53350 603 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 GAD2Q05329 585 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 SERINC3Q13530 473 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 SLC12A1Q13621 1099 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 GAB4Q2WGN9 574 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 FSCBQ5H9T9 825 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 TRIM68Q6AZZ1 485 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 DARS2Q6PI48 645 aaKnown RBP16.4■□□□□ 0.22
CLDN11-208ENST00000488989 SYDE1Q6ZW31 735 aaPredicted RBP16.4■□□□□ 0.22
CLDN11-208ENST00000488989 MAATS1Q7Z4T9 603 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 CARNMT1Q8N4J0 409 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 WFDC5Q8TCV5 224 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 ALG14Q96F25 216 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 HMCESQ96FZ2 354 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 LGMNQ99538 433 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 TMEM121Q9BTD3 319 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 RPP25Q9BUL9 199 aaKnown RBP16.4■□□□□ 0.22
CLDN11-208ENST00000488989 ECT2Q9H8V3 914 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 KIAA1522Q9P206 1035 aaPredicted RBP16.4■□□□□ 0.22
CLDN11-208ENST00000488989 CLEC4EQ9ULY5 219 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 ZNF148Q9UQR1 794 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 NUMBLQ9Y6R0 609 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 TICRRQ7Z2Z1 1910 aa16.4■□□□□ 0.22
CLDN11-208ENST00000488989 EYSQ5T1H1 3165 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 A0A0D9SEW6 157 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 BHMG1C9JSJ3 638 aaPredicted RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 NEDD8-MDP1E9PL57 170 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 DFFAO00273 331 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ARNTLO00327 626 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 MTSS1O43312 755 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 CACNG3O60359 315 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ECEL1O95672 775 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ADH5P11766 374 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ARSAP15289 507 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ACVRL1P37023 503 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 DR1Q01658 176 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 CDH18Q13634 790 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 PTCRAQ6ISU1 281 aaPredicted RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 TIGD7Q6NT04 549 aaPredicted RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 C8orf74Q6P047 294 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 KIAA0907Q7Z7F0 614 aaPredicted RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 CCDC117Q8IWD4 279 aaPredicted RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ETFBKMTQ8IXQ9 262 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 YAF2Q8IY57 180 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 CCDC13Q8IYE1 715 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ATPAF2Q8N5M1 289 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 MAML1Q92585 1016 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 ZFYVE19Q96K21 471 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 TRMT61BQ9BVS5 477 aaKnown RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 PLK2Q9NYY3 685 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 IPO11Q9UI26 975 aaKnown RBP16.39■□□□□ 0.21
CLDN11-208ENST00000488989 FAM50BQ9Y247 325 aa16.39■□□□□ 0.21
CLDN11-208ENST00000488989 CXorf51AA0A1B0GTR3 108 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 TTI1O43156 1089 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 GAS8O95995 478 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 PEX11BO96011 259 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 GDF10P55107 478 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 IL10RBQ08334 325 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 LMAN2Q12907 356 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 RUNX3Q13761 415 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 GRM2Q14416 872 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 ANO4Q32M45 955 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 RNF219Q5W0B1 726 aaPredicted RBP16.38■□□□□ 0.21
CLDN11-208ENST00000488989 HEATR6Q6AI08 1181 aaKnown RBP16.38■□□□□ 0.21
CLDN11-208ENST00000488989 ARHGAP36Q6ZRI8 547 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 JAMLQ86YT9 394 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 CPA6Q8N4T0 437 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 CCDC33Q8N5R6 958 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 CCNYQ8ND76 341 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 ST13P5Q8NFI4 369 aaPredicted RBP16.38■□□□□ 0.21
CLDN11-208ENST00000488989 OR7D4Q8NG98 312 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 HTR3CQ8WXA8 447 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 BHMTQ93088 406 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 CCDC114Q96M63 670 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 FEM1AQ9BSK4 669 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 C10orf88Q9H8K7 445 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 PDFQ9HBH1 243 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 IGSF9Q9P2J2 1179 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 XIRP2A4UGR9 3374 aa16.38■□□□□ 0.21
CLDN11-208ENST00000488989 C5orf60A6NFR6 353 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 OTOL1A6NHN0 477 aaPredicted RBP16.37■□□□□ 0.21
CLDN11-208ENST00000488989 MATN3O15232 486 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 KCNN4O15554 427 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 KDELR3O43731 214 aa16.37■□□□□ 0.21
CLDN11-208ENST00000488989 PRAMEF11O60813 436 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms