RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PACSIN1Q9BY11 444 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 KLHL4Q9C0H6 718 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TNMDQ9H2S6 317 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TTYH1Q9H313 450 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 C12orf65Q9H3J6 166 aaKnown RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TASP1Q9H6P5 420 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 LIN28AQ9H9Z2 209 aaKnown RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SCPEP1Q9HB40 452 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PCDHB16Q9NRJ7 776 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 WSB2Q9NYS7 404 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MOCS1Q9NZB8 636 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 EHD2Q9NZN4 543 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 FAM30AQ9NZY2 134 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 HESX1Q9UBX0 185 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MAGEL2Q9UJ55 1249 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CDH22Q9UJ99 828 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SH3BGRL2Q9UJC5 107 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ANAPC2Q9UJX6 822 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 RUVBL1Q9Y265 456 aaKnown RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 VWA7Q9Y334 891 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ADAM18Q9Y3Q7 739 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 FER1L4A9Z1Z3 1794 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 A0A1W2PQF6 199 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 URADA6NGE7 173 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF785A8K8V0 405 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TEX22C9J3V5 150 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 GCOM1H8Y6P7 765 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 M0QYG6 137 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 IKBKBO14920 756 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 LDLRAD4O15165 306 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 WDR46O15213 610 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 RECQL5O94762 991 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 KIF20AO95235 890 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 GCNT3O95395 438 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TUBBP07437 444 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 EEF2P13639 858 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 GYPEP15421 78 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CHN1P15882 459 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 KRT4P19013 534 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 IL10P22301 178 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CPT2P23786 658 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TNFRSF8P28908 595 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 RFC1P35251 1148 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 PTGS2P35354 604 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 PPARGP37231 505 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 PBX3P40426 434 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 KCNQ1P51787 676 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF135P52742 658 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CDH15P55291 814 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 EIF3BP55884 814 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TMEM115Q12893 351 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TDGQ13569 410 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ITGA7Q13683 1181 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 THOC5Q13769 683 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 BAATQ14032 418 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 BOP1Q14137 746 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CSHL1Q14406 222 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 PCOLCEQ15113 449 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 RABEP1Q15276 862 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TBR1Q16650 682 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 MEP1BQ16820 701 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 RNF151Q2KHN1 245 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 KBTBD12Q3ZCT8 623 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ANKDD1AQ495B1 522 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 AMOTQ4VCS5 1084 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ZRANB3Q5FWF4 1079 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 FAM160B1Q5W0V3 765 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 AFMIDQ63HM1 303 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TTI2Q6NXR4 508 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CAVIN1Q6NZI2 390 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TMEM154Q6P9G4 183 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SARM1Q6SZW1 724 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CHST9Q7L1S5 443 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 OTOP2Q7RTS6 562 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 PPP1R42Q7Z4L9 355 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CLEC14AQ86T13 490 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SGMS1Q86VZ5 419 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.59□□□□□ -1.837e-6■■□□□ 11.5
PRPF4-203ENST00000488937 DPP10Q8N608 796 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 IL17RCQ8NAC3 791 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ZBTB8BQ8NAP8 495 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 FBXO18Q8NFZ0 1043 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 RFWD2Q8NHY2 731 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 MBD3L2Q8NHZ7 208 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 WDR48Q8TAF3 677 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SPATA20Q8TB22 786 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ABHD5Q8WTS1 349 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 HSPH1Q92598 858 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 KIF1BPQ96EK5 621 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SAAL1Q96ER3 474 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 MCRS1Q96EZ8 462 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SIPA1Q96FS4 1042 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 BICD1Q96G01 975 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 MASTLQ96GX5 879 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF668Q96K58 619 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CMTM3Q96MX0 182 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 GBP5Q96PP8 586 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 MYOCQ99972 504 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms