RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TMLHEQ9NVH6 421 aa3.59□□□□□ -1.83
CD46-215ENST00000488596 THAP1Q9NVV9 213 aa3.59□□□□□ -1.83
CD46-215ENST00000488596 KLQ9UEF7 1012 aa3.59□□□□□ -1.83
CD46-215ENST00000488596 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
CD46-215ENST00000488596 PRR23D1E9PI22 279 aaPredicted RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 PLAUP00749 431 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 PRR23D2P0DMB1 279 aaPredicted RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 TGM2P21980 687 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 TACR3P29371 465 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 HOXA7P31268 230 aaPredicted RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 PNPLA4P41247 253 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ADPRHP54922 357 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ALKBH1Q13686 389 aaKnown RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 ANKRD1Q15327 319 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ARL13AQ5H913 290 aaPredicted RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 CBWD5Q5RIA9 395 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 C10orf25Q5T742 122 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ZNF813Q6ZN06 617 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 RBM44Q6ZP01 1051 aaKnown RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 MDGA2Q7Z553 956 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 HEATR4Q86WZ0 1026 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 UEVLDQ8IX04 471 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ESX1Q8N693 406 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ANKRD44Q8N8A2 993 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ARL14EPQ8N8R7 260 aaPredicted RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 ADPRHL1Q8NDY3 354 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 FAM110DQ8TAY7 271 aaPredicted RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 ZNF398Q8TD17 642 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 ATP2A3Q93084 1043 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 MARK4Q96L34 752 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 TBATAQ96M53 351 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 PPP1R10Q96QC0 940 aaKnown RBP3.58□□□□□ -1.84
CD46-215ENST00000488596 NPAS1Q99742 590 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 CTDSP1Q9GZU7 261 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 RASSF1Q9NS23 344 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 TMEM160Q9NX00 188 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 SLC25A13Q9UJS0 675 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 SPATA31A5Q5VU36 1347 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 SPATA31A7Q8IWB4 1347 aa3.58□□□□□ -1.84
CD46-215ENST00000488596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 SLC22A23A1A5C7 686 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 SYN3O14994 580 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 INPPL1O15357 1258 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 DHX16O60231 1041 aaKnown RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 RNF8O76064 485 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 ALPLP05186 524 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 TMEM191BP0C7N4 346 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 AKR1A1P14550 325 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 PKMP14618 531 aaKnown RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 ARSAP15289 507 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 MCM2P49736 904 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 G3BP1Q13283 466 aaKnown RBP eCLIP3.57□□□□□ -1.84
CD46-215ENST00000488596 TRPC3Q13507 836 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 TDGQ13569 410 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 ZNF268Q14587 947 aaPredicted RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 TWIST1Q15672 202 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 SLC4A8Q2Y0W8 1093 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 LEXMQ3ZCV2 418 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 GLE1Q53GS7 698 aaKnown RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 RUNDC3AQ59EK9 446 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 SH2D4BQ5SQS7 431 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 MAP3K21Q5TCX8 1036 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 ATG16L1Q676U5 607 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 KIAA1161Q6NSJ0 714 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 SLC30A9Q6PML9 568 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 ZNF474Q6S9Z5 364 aaPredicted RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 BBS12Q6ZW61 710 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 EMSYQ7Z589 1322 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 SCN4BQ8IWT1 228 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 C2CD4CQ8TF44 421 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 HTRA1Q92743 480 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 P2RY11Q96G91 374 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 SCNM1Q9BWG6 230 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 GPR63Q9BZJ6 419 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 FOXP1Q9H334 677 aaPredicted RBP3.57□□□□□ -1.84
CD46-215ENST00000488596 IL21RQ9HBE5 538 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 ARL15Q9NXU5 204 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 PDP2Q9P2J9 529 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 MAFFQ9ULX9 164 aa3.57□□□□□ -1.84
CD46-215ENST00000488596 TCRBV7S3A2A0A539 114 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 FAM90A10PA6NDY2 464 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 CD8B2A6NJW9 211 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 SAC3D1A6NKF1 404 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 MCIDASD6RGH6 385 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 PEX12O00623 359 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 HOXC11O43248 304 aaPredicted RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 ANP32CO43423 234 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 WDHD1O75717 1129 aaPredicted RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 HOXB9P17482 250 aaPredicted RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 CD72P21854 359 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 RPS6KB1P23443 525 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 GSTM2P28161 218 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 MVDP53602 400 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 NANOS2P60321 138 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 ARHGAP8P85298 464 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 TLE2Q04725 743 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 ZBTB16Q05516 673 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms