RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-241	ENST00000487169	CST3	P01034	146 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	OR56A5	P0C7T3	313 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	NQO1	P15559	274 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	CTNNB1	P35222	781 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	SLC1A6	P48664	564 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	ANXA11	P50995	505 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	NAGLU	P54802	743 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	PGS1	Q32NB8	556 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	LLGL2	Q6P1M3	1020 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	TTC7B	Q86TV6	843 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	MICU2	Q8IYU8	434 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	BSND	Q8WZ55	320 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	MED8	Q96G25	268 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	LGMN	Q99538	433 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	B3GNT5	Q9BYG0	378 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	NFKBIZ	Q9BYH8	718 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	PRDM16	Q9HAZ2	1276 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	ARHGAP28	Q9P2N2	729 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	ROBO3	Q96MS0	1386 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	MMP3	P08254	477 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	MYBL2	P10244	700 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	MMP8	P22894	467 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	CD86	P42081	329 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	SCTR	P47872	440 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	LRRC23	Q53EV4	343 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	CES5A	Q6NT32	575 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	POLN	Q7Z5Q5	900 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	DENND1C	Q8IV53	801 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	ERLEC1	Q96DZ1	483 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	ZYG11B	Q9C0D3	744 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	SCN3B	Q9NY72	215 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	FBXO10	Q9UK96	956 aa		13.59	□□□□□ -0.23
HDLBP-241	ENST00000487169	SLC9A3R1	O14745	358 aa	Predicted RBP	13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	ADH1A	P07327	375 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	CYP2A7	P20853	494 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	PAX3	P23760	479 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	FMO4	P31512	558 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	GRK4	P32298	578 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	TAS2R40	P59535	323 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	MRPS5	P82675	430 aa	Known RBP	13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	PTPN20	Q4JDL3	420 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	FNDC3B	Q53EP0	1204 aa	Known RBP	13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	ZNF557	Q8N988	423 aa	Predicted RBP	13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	JOSD2	Q8TAC2	188 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	EXOC2	Q96KP1	924 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	DPY30	Q9C005	99 aa		13.58	□□□□□ -0.23
HDLBP-241	ENST00000487169	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.58	□□□□□ -0.23	7e-8	■□□□□ 8.8
HDLBP-241	ENST00000487169	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.58	□□□□□ -0.23	4e-9	■■■□□ 16.6
HDLBP-241	ENST00000487169	PIAS1	O75925	651 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	VHL	P40337	213 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	HSPA14	Q0VDF9	509 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	EIF2B5	Q13144	721 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	ANKRD23	Q86SG2	305 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	C11orf74	Q86VG3	221 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	FAM120B	Q96EK7	910 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	SH3GL1	Q99961	368 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	ZNF670	Q9BS34	389 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	MLPH	Q9BV36	600 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	HIPK3	Q9H422	1215 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	PIF1	Q9H611	641 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	PCYOX1	Q9UHG3	505 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	TAGLN3	Q9UI15	199 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	PADI3	Q9ULW8	664 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	KANSL1L	A0AUZ9	987 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	TMEM88B	A6NKF7	163 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	FCHO1	O14526	889 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	ASGR1	P07306	291 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	PIRT	P0C851	137 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	ATP6V1B1	P15313	513 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	CLK1	P49759	484 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	TARBP2	Q15633	366 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	PCID2	Q5JVF3	399 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	SPRYD7	Q5W111	196 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	MON1A	Q86VX9	555 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	TRAPPC5	Q8IUR0	188 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	DEFB107A	Q8IZN7	70 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	GRIN3A	Q8TCU5	1115 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	GPR152	Q8TDT2	470 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	CATSPER2	Q96P56	530 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	CCT7	Q99832	543 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	IGLV3-22	A0A075B6J6	115 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	ALDH9A1	P49189	494 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	POU5F2	Q8N7G0	328 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	EIF1AD	Q8N9N8	165 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	FNDC5	Q8NAU1	212 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	LRRN4	Q8WUT4	740 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	CCDC3	Q9BQI4	270 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	MRPL45	Q9BRJ2	306 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	DUSP16	Q9BY84	665 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	LRRC19	Q9H756	370 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	PADI4	Q9UM07	663 aa		13.58	□□□□□ -0.24
HDLBP-241	ENST00000487169	KRT87P	A6NCN2	255 aa		13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	XPO1	O14980	1071 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	CHAD	O15335	359 aa		13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	DUSP4	Q13115	394 aa		13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	SETMAR	Q53H47	684 aa	Predicted RBP	13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	C9orf57	Q5W0N0	161 aa		13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	TOP6BL	Q8N6T0	577 aa		13.57	□□□□□ -0.24
HDLBP-241	ENST00000487169	ATAD1	Q8NBU5	361 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms