RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 RAB6CQ53S08 254 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 PPP6R3Q5H9R7 873 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 HEATR6Q6AI08 1181 aaKnown RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 TMEM92Q6UXU6 159 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 RFX8Q6ZV50 586 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 DSG4Q86SJ6 1040 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 PGBD3Q8N328 593 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 LZTR1Q8N653 840 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 MDGA1Q8NFP4 955 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 HMGB4Q8WW32 186 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 SORCS1Q8WY21 1168 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 ACOX2Q99424 681 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 RAB6CQ9H0N0 254 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 ATP13A1Q9HD20 1204 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 NEU3Q9UQ49 428 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 HS3ST2Q9Y278 367 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 OR51B4Q9Y5P0 310 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 PROB1E7EW31 1015 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 FAM72CH0Y354 149 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 RPP40O75818 363 aaKnown RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 ACADMP11310 421 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 PRKCHP24723 683 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 SERPINB6P35237 376 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 WASP42768 502 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 MRE11P49959 708 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 NDST2P52849 883 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 SLC25A11Q02978 314 aaKnown RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 KRT81Q14533 505 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 ELAVL3Q14576 367 aaKnown RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 POLD3Q15054 466 aaPredicted RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 TTC31Q49AM3 519 aaPredicted RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 ODF2Q5BJF6 829 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 FAM72AQ5TYM5 149 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 LRRC38Q5VT99 294 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 IL31Q6EBC2 164 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 FAM72DQ6L9T8 149 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 CEP68Q76N32 757 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 KIAA1328Q86T90 577 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 FAM72BQ86X60 149 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 APCDD1Q8J025 514 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 ARFGAP1Q8N6T3 406 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 OR2T3Q8NH03 318 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 GAB3Q8WWW8 586 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 CASKIN2Q8WXE0 1202 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 HSPH1Q92598 858 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 PRCCQ92733 491 aaPredicted RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 NKD2Q969F2 451 aaPredicted RBP15□□□□□ -0.01
LIMS3-205ENST00000487150 ALG14Q96F25 216 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 PEBP4Q96S96 227 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 CEP44Q9C0F1 390 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 EPC1Q9H2F5 836 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 OSGEPQ9NPF4 335 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 C2orf42Q9NWW7 574 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 ZNF212Q9UDV6 495 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 HCN2Q9UL51 889 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 SCML1Q9UN30 329 aa15□□□□□ -0.01
LIMS3-205ENST00000487150 BTNL10A8MVZ5 291 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 ATP9BO43861 1147 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 KCNA4P22459 653 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 NOP2P46087 812 aaKnown RBP14.99□□□□□ -0.01
LIMS3-205ENST00000487150 VAV2P52735 878 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 MESDQ14696 234 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 PDK2Q15119 407 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 ELF2Q15723 593 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 SMTNL2Q2TAL5 461 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 ZFYVE27Q5T4F4 411 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 SLC36A4Q6YBV0 504 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 CYP4V2Q6ZWL3 525 aaPredicted RBP14.99□□□□□ -0.01
LIMS3-205ENST00000487150 VSIG1Q86XK7 387 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 UMODL1-AS1Q8N2C9 162 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 PYROXD2Q8N2H3 581 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 FAM122AQ96E09 287 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 BTBD6Q96KE9 485 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 ZNF670Q9BS34 389 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 SPON2Q9BUD6 331 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 PRDM16Q9HAZ2 1276 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 ZDHHC4Q9NPG8 344 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 GPATCH2LQ9NWQ4 482 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 DNAI1Q9UI46 699 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 VPS51Q9UID3 782 aa14.99□□□□□ -0.01
LIMS3-205ENST00000487150 A0A0D9SEW6 157 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 ARHGAP42A6NI28 874 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 ZNF487B1APH4 448 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 CBX4O00257 560 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 ALOX15BO15296 676 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 ARHGAP6O43182 974 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 SPOPO43791 374 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 LMNAP02545 664 aaKnown RBP14.98□□□□□ -0.01
LIMS3-205ENST00000487150 RARAP10276 462 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 C7P10643 843 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 GABRG2P18507 467 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 NDUFV2P19404 249 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 IL1R2P27930 398 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 RECQLP46063 649 aaPredicted RBP14.98□□□□□ -0.01
LIMS3-205ENST00000487150 KIF5AQ12840 1032 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 KCNT1Q5JUK3 1230 aa14.98□□□□□ -0.01
LIMS3-205ENST00000487150 ZNF776Q68DI1 518 aaPredicted RBP14.98□□□□□ -0.01
LIMS3-205ENST00000487150 C11orf63Q6NUN7 778 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms