RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 RRAGDQ9NQL2 400 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-227ENST00000486806 ABCB8Q9NUT2 735 aa9.81□□□□□ -0.84
MCF2L-227ENST00000486806 DNAJC17Q9NVM6 304 aaKnown RBP9.81□□□□□ -0.84
MCF2L-227ENST00000486806 KIAA1522Q9P206 1035 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-227ENST00000486806 GGA2Q9UJY4 613 aa9.81□□□□□ -0.84
MCF2L-227ENST00000486806 INTS6Q9UL03 887 aaKnown RBP9.81□□□□□ -0.84
MCF2L-227ENST00000486806 SLC27A6Q9Y2P4 619 aa9.81□□□□□ -0.84
MCF2L-227ENST00000486806 HEY1Q9Y5J3 304 aa9.81□□□□□ -0.84
MCF2L-227ENST00000486806 GOLGA6L10A0A0M3HER8 536 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 CXorf51AA0A1B0GTR3 108 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 SHISA7A6NL88 538 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 KRIT1O00522 736 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PPP1R12AO14974 1030 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 MCF2LO15068 1137 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 TRIM24O15164 1050 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 MAFKO60675 156 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 ZMPSTE24O75844 475 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PEX11BO96011 259 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PABPC1P11940 636 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 VAV1P15498 845 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 MZF1P28698 734 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 CTHP32929 405 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 ETFBP38117 255 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 SOX9P48436 509 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 DGKGP49619 791 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PAPOLAP51003 745 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PLK1P53350 603 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PFKPQ01813 784 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 ZNF33AQ06730 810 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 CKAP4Q07065 602 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PPIDQ08752 370 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 MESP2Q0VG99 397 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 NR1H3Q13133 447 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 XRCC4Q13426 336 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 SERINC3Q13530 473 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 POLD3Q15054 466 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PDK1Q15118 436 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 CCNG2Q16589 344 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PLEKHG6Q3KR16 790 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 DNTTIP2Q5QJE6 756 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 RNF219Q5W0B1 726 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 TMEM215Q68D42 235 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 TTC27Q6P3X3 843 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 ARHGAP36Q6ZRI8 547 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 BZW1Q7L1Q6 419 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 ADIPOR2Q86V24 386 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 LRRC49Q8IUZ0 686 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 ATPAF2Q8N5M1 289 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 CCDC33Q8N5R6 958 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 NAT16Q8N8M0 369 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 SPATA4Q8NEY3 305 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 TTC8Q8TAM2 541 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 CSGALNACT1Q8TDX6 532 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 C1orf54Q8WWF1 131 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 FATE1Q969F0 183 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 TSGA13Q96PP4 275 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 FEM1AQ9BSK4 669 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 BRD8Q9H0E9 1235 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 PDFQ9HBH1 243 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 RBM12Q9NTZ6 932 aaKnown RBP9.8□□□□□ -0.84
MCF2L-227ENST00000486806 DNPEPQ9ULA0 475 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 SORCS3Q9UPU3 1222 aa9.8□□□□□ -0.84
MCF2L-227ENST00000486806 KIAA1549LQ6ZVL6 1849 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 VCANP13611 3396 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 BCLAF3A2AJT9 711 aaKnown RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 ARHGAP42A6NI28 874 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 HACD1B0YJ81 288 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 SPECC1L-ADORA2AF8WAN1 911 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 CCDC188H7C350 402 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 DFFAO00273 331 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 PRAMEF11O60813 436 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 PHF2O75151 1096 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 RBP3P10745 1247 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 GLULP15104 373 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 GLDCP23378 1020 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 SLC6A11P48066 632 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 FNTAP49354 379 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 EIF3EP60228 445 aaKnown RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 ARF5P84085 180 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 BYSLQ13895 437 aaKnown RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 DMC1Q14565 340 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 GEN1Q17RS7 908 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 SLC45A4Q5BKX6 768 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 PITRM1Q5JRX3 1037 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 IER5LQ5T953 404 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 GRAMD4Q6IC98 578 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 TXNDC11Q6PKC3 985 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 ZC3H18Q86VM9 953 aaKnown RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 RALGPS2Q86X27 583 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 CDKL3Q8IVW4 592 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 CCDC117Q8IWD4 279 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 SUGP1Q8IWZ8 645 aaKnown RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 APCDD1Q8J025 514 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 AHI1Q8N157 1196 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 TERB1Q8NA31 727 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 WFIKKN2Q8TEU8 576 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 LRRN4Q8WUT4 740 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 RTP4Q96DX8 246 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms