RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PJA1Q8NG27 643 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-229ENST00000486665 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 EFR3BQ9Y2G0 817 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 SIT1Q9Y3P8 196 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
HDAC6-229ENST00000486665 KIF26AQ9ULI4 1882 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 H0Y626 953 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CES2O00748 559 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 APOL1O14791 398 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 ADH1CP00326 375 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 FGGP02679 453 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CISD3P0C7P0 127 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 OR1E1P30953 314 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 GJA4P35212 333 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 SOX9P48436 509 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 STARD6P59095 220 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 TFDP2Q14188 446 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 ITPRIPL2Q3MIP1 535 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 AFMIDQ63HM1 303 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 C1orf210Q8IVY1 113 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 ARHGAP12Q8IWW6 846 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CCDC33Q8N5R6 958 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 FIBINQ8TAL6 211 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CELF6Q96J87 481 aaKnown RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 SLC39A8Q9C0K1 460 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 RETREG1Q9H6L5 497 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 TTC7AQ9ULT0 858 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 TBC1D30Q9Y2I9 924 aa13.11□□□□□ -0.31
HDAC6-229ENST00000486665 R3HDM2Q9Y2K5 976 aaKnown RBP13.11□□□□□ -0.31
HDAC6-229ENST00000486665 MED19A0JLT2 244 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 MFSD11O43934 449 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 TJP3O95049 919 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 MAP3K6O95382 1288 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 PECAM1P16284 738 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 ZFXP17010 805 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 CD72P21854 359 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 CD70P32970 193 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 ACVRL1P37023 503 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 OPRD1P41143 372 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 MAPKAPK2P49137 400 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 NUMBP49757 651 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 LMAN2Q12907 356 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 NR1H3Q13133 447 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 SIX1Q15475 284 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 LONRF2Q1L5Z9 754 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 RNF219Q5W0B1 726 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-229ENST00000486665 ERMP1Q7Z2K6 904 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 MFN1Q8IWA4 741 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 UMODL1-AS1Q8N2C9 162 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 OR7D4Q8NG98 312 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 ACTRT1Q8TDG2 376 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 HAUS1Q96CS2 278 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 ALG14Q96F25 216 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 TRPV5Q9NQA5 729 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 HEY1Q9Y5J3 304 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 OR51B4Q9Y5P0 310 aa13.1□□□□□ -0.31
HDAC6-229ENST00000486665 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 ILVBLA1L0T0 632 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 SHISA7A6NL88 538 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 RASA4BC9J798 803 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 RASA4O43374 803 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 CACNG3O60359 315 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 TULP3O75386 442 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 RHOCP08134 193 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 COL4A2P08572 1712 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 HLA-FP30511 346 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 CSKP41240 450 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 GNA12Q03113 381 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 ARHGAP36Q6ZRI8 547 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 B4GALNT4Q76KP1 1039 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 APCDD1Q8J025 514 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 LZTR1Q8N653 840 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms