RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PMLP29590 882 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 ATP11AP98196 1134 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 GRIK2Q13002 908 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 SLC14A1Q13336 389 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 ELAVL3Q14576 367 aaKnown RBP18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 CLEC16AQ2KHT3 1053 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 CCDC14Q49A88 953 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 CAVIN1Q6NZI2 390 aaKnown RBP18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 PIP4P1Q86T03 277 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 FAM131BQ86XD5 332 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 PHF13Q86YI8 300 aaPredicted RBP18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 DEFB124Q8NES8 71 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 OR2I1PQ8NGU4 316 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 SNX19Q92543 992 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 BIRC7Q96CA5 298 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 AGPAT1Q99943 283 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 OMDQ99983 421 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 MUC3BQ9H195 1237 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 OSGEPQ9NPF4 335 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 MPP6Q9NZW5 540 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 ADAM22Q9P0K1 906 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 SERGEFQ9UGK8 458 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 ADAMTS1Q9UHI8 967 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 C2CD4BA6NLJ0 364 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 TEX33O43247 280 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 SRGAP2O75044 1071 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 GJB3O75712 270 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 RNASEH2AO75792 299 aaKnown RBP18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 FSBPO95073 299 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 ADH1BP00325 375 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 CCDC172P0C7W6 258 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 KRT3P12035 628 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 VAV1P15498 845 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 GOT1P17174 413 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 C5AR1P21730 350 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 SDC4P31431 198 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 GALCP54803 685 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 KRT83P78385 493 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 DLG2Q15700 870 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 ACCSLQ4AC99 568 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 ARTNQ5T4W7 220 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 C6orf118Q5T5N4 469 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 JOSD2Q8TAC2 188 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 FZD4Q9ULV1 537 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 CEP192Q8TEP8 1941 aa18.9■□□□□ 0.62
PRPF40A-209ENST00000486100 CNOT1A5YKK6 2376 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 IL1BP01584 269 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 CALB1P05937 261 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 CD59P13987 128 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 CD27P26842 260 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 ADRA1BP35368 520 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 PTPN9P43378 593 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 PSMD8P48556 350 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 CSNK1EP49674 416 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 AFF3P51826 1226 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 C15orf59Q2T9L4 293 aaPredicted RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 ARL13BQ3SXY8 428 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 KIAA0895LQ68EN5 471 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 IL27RAQ6UWB1 636 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 SH2D3CQ8N5H7 860 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 AADATQ8N5Z0 425 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 CENPIQ92674 756 aaPredicted RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 PSMB7Q99436 277 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 C2orf49Q9BVC5 232 aaPredicted RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 SEPT11Q9NVA2 429 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 PPARGC1AQ9UBK2 798 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 SLCO1B1Q9Y6L6 691 aa18.89■□□□□ 0.61
PRPF40A-209ENST00000486100 FAM47DPA6NHR8 397 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 LRRC72A6NJI9 287 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 MCF2LO15068 1137 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 GJB6O95452 261 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 IGHV4-34P06331 123 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 FERP16591 822 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 OR1E1P30953 314 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 ZNF165P49910 485 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 BNC1Q01954 994 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 ZNF252P-AS1Q0IIN9 211 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 CDO1Q16878 200 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 RAB6CQ53S08 254 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 NCEH1Q6PIU2 408 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 STRADAQ7RTN6 431 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 TFAP2DQ7Z6R9 452 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 DSG4Q86SJ6 1040 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 C3orf20Q8ND61 904 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 OR2T34Q8NGX1 318 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 OR8D1Q8WZ84 308 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 CNTNAP3BQ96NU0 1288 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 SELENOOQ9BVL4 669 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 CNTNAP3Q9BZ76 1288 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 ZYG11BQ9C0D3 744 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 RAB6CQ9H0N0 254 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 OSBPL2Q9H1P3 480 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 TM9SF3Q9HD45 589 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 ANGPTL2Q9UKU9 493 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 MYO6Q9UM54 1294 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 HS3ST2Q9Y278 367 aa18.88■□□□□ 0.61
PRPF40A-209ENST00000486100 PI4KAP42356 2102 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms