RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 PKN3Q6P5Z2 889 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 CHST9Q7L1S5 443 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 MFN1Q8IWA4 741 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRA2B-213ENST00000485530 NETO2Q8NC67 525 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 SORCS1Q8WY21 1168 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 ALG3Q92685 438 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 TBC1D31Q96DN5 1066 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 CSPG4P5Q96PW8 444 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 LMAN1LQ9HAT1 526 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 ARHGEF4Q9NR80 690 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 POLR3BQ9NW08 1133 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-213ENST00000485530 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 PACSIN2Q9UNF0 486 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-213ENST00000485530 FRYQ5TBA9 3013 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 CEP295Q9C0D2 2601 aa12.57□□□□□ -0.4
TRA2B-213ENST00000485530 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 TBC1D3BA6NDS4 549 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 H0Y626 953 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 KRT86O43790 486 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 SPOPO43791 374 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 TDGF1P13385 188 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 DESP17661 470 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 ERCC2P18074 760 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 CSKP41240 450 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 KIR2DL1P43626 348 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 RPS9P46781 194 aaKnown RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 PLK1P53350 603 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 CDH6P55285 790 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 AMPD2Q01433 879 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 ZNF177Q13360 481 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 COL9A2Q14055 689 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 LPAL2Q16609 132 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 FUT11Q495W5 492 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 GRAMD4Q6IC98 578 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 RHOT1Q8IXI2 618 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 TERB1Q8NA31 727 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 KCTD6Q8NC69 237 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 PCDH19Q8TAB3 1148 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 MSANTD3Q96H12 275 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 CALR3Q96L12 384 aaKnown RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 ACOX2Q99424 681 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 NELL2Q99435 816 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 PSMB7Q99436 277 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 FAM126AQ9BYI3 521 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
TRA2B-213ENST00000485530 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 GGA2Q9UJY4 613 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
TRA2B-213ENST00000485530 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 DCLK1O15075 740 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 DDX3YO15523 660 aaKnown RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 NRDCO43847 1150 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 KRT7P08729 469 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 PABPC1P11940 636 aaKnown RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 DRD1P21728 446 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 GLDCP23378 1020 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 OR1E1P30953 314 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 ACVRL1P37023 503 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 TPI1P60174 286 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 ADCY2Q08462 1091 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 MTAPQ13126 283 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 LLGL1Q15334 1064 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 TAZQ16635 292 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 ANKRD20A8PQ5CZ79 823 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 PITRM1Q5JRX3 1037 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 TTC39BQ5VTQ0 682 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 RNF219Q5W0B1 726 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 AFMIDQ63HM1 303 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 LAIR1Q6GTX8 287 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 AADACL2Q6P093 401 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 MFSD7Q6UXD7 560 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 Q6ZS52 159 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 TXLNBQ8N3L3 684 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 NPWQ8N729 165 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 PQLC3Q8N755 202 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 RTL3Q8N8U3 475 aaKnown RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 OR7D4Q8NG98 312 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 EPAS1Q99814 870 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 HERPUD2Q9BSE4 406 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
TRA2B-213ENST00000485530 KIAA1522Q9P206 1035 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-213ENST00000485530 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms