RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ZSCAN23Q3MJ62 389 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 BBS9Q3SYG4 887 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 GRAMD4Q6IC98 578 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 JADE1Q6IE81 842 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 LSMEM2Q8N112 164 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 FAM26EQ8N5C1 309 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 KIAA1958Q8N8K9 716 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 ENOX1Q8TC92 643 aaKnown RBP5.65□□□□□ -1.5
PTPN4-210ENST00000485247 SAP25Q8TEE9 199 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 RFFLQ8WZ73 363 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 PRCCQ92733 491 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-210ENST00000485247 EXTL1Q92935 676 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 VCPIP1Q96JH7 1222 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 SLC6A18Q96N87 628 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 ELF4Q99607 663 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-210ENST00000485247 FOXP3Q9BZS1 431 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 HAPLN2Q9GZV7 340 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 PRDM14Q9GZV8 571 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 BHMT2Q9H2M3 363 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 TUFT1Q9NNX1 390 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 SPHK2Q9NRA0 654 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 METTL5Q9NRN9 209 aaKnown RBP5.65□□□□□ -1.5
PTPN4-210ENST00000485247 THSD1Q9NS62 852 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 GJB4Q9NTQ9 266 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 ARHGAP28Q9P2N2 729 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 GTF3C4Q9UKN8 822 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 STON1Q9Y6Q2 735 aa5.65□□□□□ -1.5
PTPN4-210ENST00000485247 ANAPC1Q9H1A4 1944 aa5.65□□□□□ -1.51
PTPN4-210ENST00000485247 FLNCQ14315 2725 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 TMEM82A0PJX8 343 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 CLEC18AA5D8T8 446 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 ZNF840PA6NDX5 716 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 NEDD8-MDP1E9PL57 170 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 CPLX1O14810 134 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 HCRTO43612 131 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 SYNCRIPO60506 623 aaKnown RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 NEMFO60524 1076 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 HIP1RO75146 1068 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 FSBPO95073 299 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 OLFM2O95897 454 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 IGLV3-19P01714 112 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 HMGB1P09429 215 aaKnown RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 PFKLP17858 780 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 PAX3P23760 479 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 CD27P26842 260 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 PDIA3P30101 505 aaKnown RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 LSSP48449 732 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 TAF6P49848 677 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 C21orf59P57076 290 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 MYL7Q01449 175 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 MCL1Q07820 350 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 RAD51AP2Q09MP3 1159 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 ST3GAL1Q11201 340 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 STRN3Q13033 797 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 KRT32Q14532 448 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 SHBQ15464 509 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 ARL13BQ3SXY8 428 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 CLEC18BQ6UXF7 455 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 ZPBP2Q6X784 338 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 RNF111Q6ZNA4 994 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 SPATA2LQ8IUW3 424 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 BBS7Q8IWZ6 715 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 LILRA2Q8N149 483 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 OXR1Q8N573 874 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 CLEC18CQ8NCF0 446 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 FBXO15Q8NCQ5 510 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 LEO1Q8WVC0 666 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 BIRC7Q96CA5 298 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 OTUB2Q96DC9 234 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 MRRFQ96E11 262 aaKnown RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 MMS19Q96T76 1030 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 ACE2Q9BYF1 805 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 TRIM9Q9C026 710 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 EPB41L4BQ9H329 900 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 POLR1BQ9H9Y6 1135 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 ASCL3Q9NQ33 180 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 DDX43Q9NXZ2 648 aaKnown RBP5.64□□□□□ -1.51
PTPN4-210ENST00000485247 TCFL5Q9UL49 500 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 SH3BP1Q9Y3L3 701 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 RELNP78509 3460 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 LRRK2Q5S007 2527 aa5.64□□□□□ -1.51
PTPN4-210ENST00000485247 C2CD3Q4AC94 2353 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 KPNA7A9QM74 516 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 VILLO15195 856 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 SHOXO15266 292 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 SIGLEC6O43699 453 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 PSPNO60542 156 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 DTNBO60941 627 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 OAS1P00973 400 aaKnown RBP5.63□□□□□ -1.51
PTPN4-210ENST00000485247 TYRP14679 529 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 RPL10P27635 214 aaKnown RBP5.63□□□□□ -1.51
PTPN4-210ENST00000485247 RPA1P27694 616 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 E2F1Q01094 437 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 TAF10Q12962 218 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 TMEM132DQ14C87 1099 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 CFAP221Q4G0U5 840 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 TPGS1Q6ZTW0 290 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 DENND5BQ6ZUT9 1274 aa5.63□□□□□ -1.51
PTPN4-210ENST00000485247 USP53Q70EK8 1073 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms