RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	VAV1	P15498	845 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CMA1	P23946	247 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	MAT2A	P31153	395 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	RPL34	P49207	117 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	STK19	P49842	368 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	METAP1	P53582	386 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	LY6D	Q14210	128 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CNGA2	Q16280	664 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CBWD6	Q4V339	395 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CBWD3	Q5JTY5	395 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CBWD5	Q5RIA9	395 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	NEK5	Q6P3R8	708 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	BEND5	Q7L4P6	421 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	DQX1	Q8TE96	717 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	TFAP2B	Q92481	460 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	GRAMD1A	Q96CP6	724 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	IFT43	Q96FT9	208 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	MED8	Q96G25	268 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	PREB	Q9HCU5	417 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	THSD1	Q9NS62	852 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	UCKL1	Q9NWZ5	548 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	SARDH	Q9UL12	918 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CFAP45	Q9UL16	551 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	PPM1H	Q9ULR3	514 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	MAPK8IP1	Q9UQF2	711 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	HPSE	Q9Y251	543 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555	CEP83	Q9Y592	693 aa		12.82	□□□□□ -0.36
PABPC4-215	ENST00000484555		K7ELQ4	463 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	ARHGAP6	O43182	974 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	ATP9B	O43861	1147 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	CS	O75390	466 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	PIAS2	O75928	621 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	WISP1	O95388	367 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	THEGL	P0DJG4	465 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	ZSCAN22	P10073	491 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	PFKFB1	P16118	471 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	TBXAS1	P24557	533 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	RGS7	P49802	495 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	DUSP3	P51452	185 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	OXCT1	P55809	520 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	CNTN1	Q12860	1018 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	DPYD	Q12882	1025 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	STIL	Q15468	1287 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	LGI2	Q8N0V4	545 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	CLEC4C	Q8WTT0	213 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	OR8D1	Q8WZ84	308 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	ERCC4	Q92889	916 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	BTN2A3P	Q96KV6	586 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	APOLD1	Q96LR9	279 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	NLGN3	Q9NZ94	848 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	TJP2	Q9UDY2	1190 aa		12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	XPO7	Q9UIA9	1087 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-215	ENST00000484555	LY6G6E	A0A0G2JKS1	128 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555		A0A1B0GVL5	298 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	C1QTNF3-AMACR	E9PGA6	284 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555		K7ENP7	123 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	PIK3R2	O00459	728 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	RIOK3	O14730	519 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	MCF2L	O15068	1137 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	SCAMP1	O15126	338 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	CETN3	O15182	167 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	F13A1	P00488	732 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	ALPPL2	P10696	532 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	EPB41	P11171	864 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	TACR2	P21452	398 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	TAS2R38	P59533	333 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	ISX	Q2M1V0	245 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	INO80C	Q6PI98	192 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	TMC6	Q7Z403	805 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	CCAR2	Q8N163	923 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	FAM174A	Q8TBP5	190 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	ALG14	Q96F25	216 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	CCDC97	Q96F63	343 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	VCPIP1	Q96JH7	1222 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	SLC46A1	Q96NT5	459 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	PPP1R9B	Q96SB3	815 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	PRMT1	Q99873	361 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	ZSWIM1	Q9BR11	485 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	DUSP23	Q9BVJ7	150 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	EVA1B	Q9NVM1	165 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	NAALADL1	Q9UQQ1	740 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	CA5B	Q9Y2D0	317 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555		U3KQA8	63 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	DOCK9	Q9BZ29	2069 aa		12.8	□□□□□ -0.36
PABPC4-215	ENST00000484555	FAM237A	A0A1B0GTK4	181 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	NEMP2	A6NFY4	417 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	FFAR2	O15552	330 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	SART1	O43290	800 aa	Known RBP	12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	MOCS2	O96007	188 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	IGLV3-25	P01717	112 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	APOE	P02649	317 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	PRR29	P0C7W0	189 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	ZNF284	Q2VY69	593 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	SYPL2	Q5VXT5	272 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	RAP1GAP2	Q684P5	730 aa		12.79	□□□□□ -0.36
PABPC4-215	ENST00000484555	CXorf57	Q6NSI4	855 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms