RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 USP18Q9UMW8 372 aa27.35■■□□□ 1.97
SMDT1-203ENST00000484235 HTR7P34969 479 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 MAPKAPK2P49137 400 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 KRT83P78385 493 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 SEMA3BQ13214 749 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 HNRNPA1L2Q32P51 320 aaKnown RBP27.34■■□□□ 1.97
SMDT1-203ENST00000484235 PRR23BQ6ZRT6 265 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 C11orf74Q86VG3 221 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 ZNF366Q8N895 744 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 ZNF564Q8TBZ8 553 aaPredicted RBP27.34■■□□□ 1.97
SMDT1-203ENST00000484235 RPL10LQ96L21 214 aaKnown RBP27.34■■□□□ 1.97
SMDT1-203ENST00000484235 PEBP4Q96S96 227 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 C2orf49Q9BVC5 232 aaPredicted RBP27.34■■□□□ 1.97
SMDT1-203ENST00000484235 MKRN2Q9H000 416 aaKnown RBP27.34■■□□□ 1.97
SMDT1-203ENST00000484235 PRDM16Q9HAZ2 1276 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 PRSS16Q9NQE7 514 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 DLL3Q9NYJ7 618 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 AP4E1Q9UPM8 1137 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 SMG5Q9UPR3 1016 aaKnown RBP27.34■■□□□ 1.97
SMDT1-203ENST00000484235 NEU3Q9UQ49 428 aa27.34■■□□□ 1.97
SMDT1-203ENST00000484235 A0A0D9SEW6 157 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 MED19A0JLT2 244 aaPredicted RBP27.33■■□□□ 1.97
SMDT1-203ENST00000484235 CREB3O43889 395 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 EPHB2P29323 1055 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 CDC25BP30305 580 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 BOLA3Q53S33 107 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 METTL3Q86U44 580 aaKnown RBP27.33■■□□□ 1.97
SMDT1-203ENST00000484235 TMPRSS6Q8IU80 811 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 CCDC170Q8IYT3 715 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 OR2T3Q8NH03 318 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 ZC3H10Q96K80 434 aaKnown RBP27.33■■□□□ 1.97
SMDT1-203ENST00000484235 BTBD6Q96KE9 485 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 FBRSQ9HAH7 460 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 LCMT1Q9UIC8 334 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 INVSQ9Y283 1065 aa27.33■■□□□ 1.97
SMDT1-203ENST00000484235 NCOR2Q9Y618 2525 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 TARSL2A2RTX5 802 aaKnown RBP27.32■■□□□ 1.96
SMDT1-203ENST00000484235 ZNF217O75362 1048 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 P2RY2P41231 377 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 NUMBP49757 651 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 COPAP53621 1224 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 GNA12Q03113 381 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 CYP4V2Q6ZWL3 525 aaPredicted RBP27.32■■□□□ 1.96
SMDT1-203ENST00000484235 SPACA7Q96KW9 195 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 PSMB7Q99436 277 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 SNRNP25Q9BV90 132 aaKnown RBP27.32■■□□□ 1.96
SMDT1-203ENST00000484235 DHX35Q9H5Z1 703 aaKnown RBP27.32■■□□□ 1.96
SMDT1-203ENST00000484235 GPATCH2LQ9NWQ4 482 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 SLC25A13Q9UJS0 675 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 INTUQ9ULD6 942 aa27.32■■□□□ 1.96
SMDT1-203ENST00000484235 TTC34A8MYJ7 566 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 DCLK1O15075 740 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 C7P10643 843 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 ETFBP38117 255 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 STK19P49842 368 aaPredicted RBP27.31■■□□□ 1.96
SMDT1-203ENST00000484235 PUM1Q14671 1186 aaKnown RBP eCLIP27.31■■□□□ 1.96
SMDT1-203ENST00000484235 MAP7D1Q3KQU3 841 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 KBTBD6Q86V97 674 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 DCAF4L2Q8NA75 395 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 RLN3Q8WXF3 142 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 SIPA1Q96FS4 1042 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 SPON2Q9BUD6 331 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 SLC6A17Q9H1V8 727 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 CATSPERBQ9H7T0 1116 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 NDFIP2Q9NV92 336 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 IMPACTQ9P2X3 320 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 DNAI1Q9UI46 699 aa27.31■■□□□ 1.96
SMDT1-203ENST00000484235 EDDM13A0A1B0GTR0 161 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 FGF10O15520 208 aaPredicted RBP27.3■■□□□ 1.96
SMDT1-203ENST00000484235 ZNF135P52742 658 aaPredicted RBP27.3■■□□□ 1.96
SMDT1-203ENST00000484235 CA9Q16790 459 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 DAB2IPQ5VWQ8 1189 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 LAIR1Q6GTX8 287 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 KIAA1324Q6UXG2 1013 aaKnown RBP27.3■■□□□ 1.96
SMDT1-203ENST00000484235 TMTC1Q8IUR5 882 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 RTL3Q8N8U3 475 aaKnown RBP27.3■■□□□ 1.96
SMDT1-203ENST00000484235 OR7D4Q8NG98 312 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 PRCCQ92733 491 aaPredicted RBP27.3■■□□□ 1.96
SMDT1-203ENST00000484235 MAGEH1Q9H213 219 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 MTG2Q9H4K7 406 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 DONSONQ9NYP3 566 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 VPS51Q9UID3 782 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 HS3ST2Q9Y278 367 aa27.3■■□□□ 1.96
SMDT1-203ENST00000484235 WASH4PA8MWX3 477 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 ATP9BO43861 1147 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 LCA5LO95447 670 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 FECHP22830 423 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 IL1R2P27930 398 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 TPI1P60174 286 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 LPAL2Q16609 132 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 C9orf64Q5T6V5 341 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 DGLUCYQ7Z3D6 616 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 FAM160A2Q8N612 972 aaPredicted RBP27.29■■□□□ 1.96
SMDT1-203ENST00000484235 SLC35G2Q8TBE7 412 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 HINFPQ9BQA5 517 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 ITM2CQ9NQX7 267 aa27.29■■□□□ 1.96
SMDT1-203ENST00000484235 MAP3K13O43283 966 aa27.28■■□□□ 1.96
SMDT1-203ENST00000484235 SNAP91O60641 907 aa27.28■■□□□ 1.96
SMDT1-203ENST00000484235 RAMP2O60895 175 aa27.28■■□□□ 1.96
SMDT1-203ENST00000484235 SIN3BO75182 1162 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms