RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ERLEC1Q96DZ1 483 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 SIPA1Q96FS4 1042 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 NCAPGQ9BPX3 1015 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 MAGEB5Q9BZ81 275 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 TRIM5Q9C035 493 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 THAP2Q9H0W7 228 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 ITM2CQ9NQX7 267 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 SLCO3A1Q9UIG8 710 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 VPS28Q9UK41 221 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 HS3ST2Q9Y278 367 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 EDDM13A0A1B0GTR0 161 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 CXorf51AA0A1B0GTR3 108 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 TTC34A8MYJ7 566 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 EIF3CLB5ME19 914 aaKnown RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 ATP9BO43861 1147 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 HTR7P34969 479 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 STK19P49842 368 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 ZBTB16Q05516 673 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 CCDC122Q5T0U0 273 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 C9orf64Q5T6V5 341 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 SCYL2Q6P3W7 929 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 KIAA1324Q6UXG2 1013 aaKnown RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 SLC36A4Q6YBV0 504 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 PRCCQ92733 491 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 EIF3CQ99613 913 aaKnown RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 HINFPQ9BQA5 517 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 C2orf49Q9BVC5 232 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 MUC3BQ9H195 1237 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 CD93Q9NPY3 652 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 ZNHIT6Q9NWK9 470 aaKnown RBP18.47■□□□□ 0.55
HDAC6-225ENST00000483506 MYO1AQ9UBC5 1043 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 NUP205Q92621 2012 aa18.47■□□□□ 0.55
HDAC6-225ENST00000483506 RALGAPA1Q6GYQ0 2036 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 A0A0D9SEW6 157 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 SIN3BO75182 1162 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 LRCH4O75427 683 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 PCK1P35558 622 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 NNMTP40261 264 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 TPMTP51580 245 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 GALCP54803 685 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 ADKP55263 362 aaKnown RBP18.46■□□□□ 0.55
HDAC6-225ENST00000483506 RPS14P62263 151 aaKnown RBP18.46■□□□□ 0.55
HDAC6-225ENST00000483506 KRT83P78385 493 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 TSR1Q2NL82 804 aaKnown RBP18.46■□□□□ 0.55
HDAC6-225ENST00000483506 PLA2G2CQ5R387 149 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 CYP4V2Q6ZWL3 525 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-225ENST00000483506 LPCAT2Q7L5N7 544 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 PSTKQ8IV42 348 aaKnown RBP18.46■□□□□ 0.55
HDAC6-225ENST00000483506 PYROXD2Q8N2H3 581 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 NIPA2Q8N8Q9 360 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 FRS2Q8WU20 508 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 PTPRN2Q92932 1015 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 MRFAP1L1Q96HT8 127 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 RPL10LQ96L21 214 aaKnown RBP18.46■□□□□ 0.55
HDAC6-225ENST00000483506 PARD6AQ9NPB6 346 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 VPS51Q9UID3 782 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 SLC25A13Q9UJS0 675 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 CYP8B1Q9UNU6 501 aa18.46■□□□□ 0.55
HDAC6-225ENST00000483506 CEP192Q8TEP8 1941 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 DMXL1Q9Y485 3027 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 WASH4PA8MWX3 477 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 AKR1B15C9JRZ8 316 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-225ENST00000483506 ZMPSTE24O75844 475 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 RNF8O76064 485 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 MIPP30301 263 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 OXTRP30559 389 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 GNA12Q03113 381 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 GFPT1Q06210 699 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-225ENST00000483506 CSRP2Q16527 193 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 ZNF776Q68DI1 518 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-225ENST00000483506 RWDD4Q6NW29 188 aaKnown RBP18.45■□□□□ 0.54
HDAC6-225ENST00000483506 SH2D3CQ8N5H7 860 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 RTL3Q8N8U3 475 aaKnown RBP18.45■□□□□ 0.54
HDAC6-225ENST00000483506 ARHGEF26Q96DR7 871 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 PEBP4Q96S96 227 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 EPAS1Q99814 870 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 MTG2Q9H4K7 406 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 WSB2Q9NYS7 404 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-225ENST00000483506 SCML1Q9UN30 329 aa18.45■□□□□ 0.54
HDAC6-225ENST00000483506 BCLAF3A2AJT9 711 aaKnown RBP18.44■□□□□ 0.54
HDAC6-225ENST00000483506 MAP3K13O43283 966 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 SNAP91O60641 907 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 CD6P30203 668 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 ETFBP38117 255 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 CLCN6P51797 869 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 ZNF75DP51815 510 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 SPEM2Q0P670 501 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 PIGHQ14442 188 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-225ENST00000483506 ELAVL3Q14576 367 aaKnown RBP18.44■□□□□ 0.54
HDAC6-225ENST00000483506 ERMARDQ5T6L9 678 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 TC2NQ8N9U0 490 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 OR7D4Q8NG98 312 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 CHP1Q99653 195 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 NUP85Q9BW27 656 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 ACE2Q9BYF1 805 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-225ENST00000483506 ARRDC1-AS1Q9H2J1 176 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 NHEJ1Q9H9Q4 299 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-225ENST00000483506 SEMA4GQ9NTN9 838 aa18.44■□□□□ 0.54
HDAC6-225ENST00000483506 NDFIP2Q9NV92 336 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms