RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 COL23A1Q86Y22 540 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 MYLK4Q86YV6 388 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC13Q8IYE1 715 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 MYOCDQ8IZQ8 938 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 LRRC43Q8N309 656 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 MPP5Q8N3R9 675 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TCP11L2Q8N4U5 519 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 DNAJC5GQ8N7S2 189 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 B4GALNT2Q8NHY0 566 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SMCR8Q8TEV9 937 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 PARD3BQ8TEW8 1205 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 PPP2R3CQ969Q6 453 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TRIM43Q96BQ3 446 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC51Q96ER9 411 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SMC6Q96SB8 1091 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 IWS1Q96ST2 819 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 NELL2Q99435 816 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 EFHD1Q9BUP0 239 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SELENOOQ9BVL4 669 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TM6SF1Q9BZW5 370 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 FAM192AQ9GZU8 254 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CENPHQ9H3R5 247 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 EBF2Q9HAK2 575 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 KIF9Q9HAQ2 790 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 STARD7Q9NQZ5 370 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 DDX25Q9UHL0 483 aaKnown RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SH2B3Q9UQQ2 575 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CNPY2Q9Y2B0 182 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 ZCCHC11Q5TAX3 1644 aaKnown RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 USP32Q8NFA0 1604 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 RAPGEF6Q8TEU7 1601 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 ADGRB2O60241 1585 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 NEURL4Q96JN8 1562 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 DISP3Q9P2K9 1392 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TTC21AQ8NDW8 1320 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 MYMKA6NI61 221 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 LRRIQ3A6PVS8 624 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 B4DLN1 442 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 RASA4BC9J798 803 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 H3BQF6 201 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 HIP1O00291 1037 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 BIRC5O15392 142 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 RASA4O43374 803 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SEC31AO94979 1220 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 INMTO95050 263 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ONECUT2O95948 504 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 EIF2S1P05198 315 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 PARP1P09874 1014 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ATXN1LP0C7T5 689 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TSPY4P0CV99 314 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TSPY10P0CW01 314 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TOP1P11387 765 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 PRF1P14222 555 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 KLRC1P26715 233 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ADORA2AP29274 412 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ALDH3A1P30838 453 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 VIPR2P41587 438 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 PSMC4P43686 418 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 HTR3AP46098 478 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 PXNP49023 591 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SLC11A2P49281 568 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 PRIM2P49643 509 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CASP5P51878 434 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 UCP3P55916 312 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TPTEP56180 551 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 LOXL3P58215 753 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ZBTB17Q13105 803 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CTBP1Q13363 440 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 XRCC4Q13426 336 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 POSTNQ15063 836 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 RBMS2Q15434 407 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SGSM1Q2NKQ1 1148 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TBC1D25Q3MII6 688 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TLDC1Q6P9B6 456 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CYB5D1Q6P9G0 228 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 EMBQ6PCB8 327 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SERPINA13PQ6UXR4 307 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SYNE3Q6ZMZ3 975 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 MEPCEQ7L2J0 689 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 OTUD6AQ7L8S5 288 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CROCCP2Q86T23 111 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC33Q8N5R6 958 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SLC15A4Q8N697 577 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TERB1Q8NA31 727 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ERMNQ8TAM6 284 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC12Q8WUD4 166 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 RSPH1Q8WYR4 309 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 KAT2BQ92831 832 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CUL5Q93034 780 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 RBM41Q96IZ5 413 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 IFT74Q96LB3 600 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 ZMAT2Q96NC0 199 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 THAP7Q9BT49 309 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 COLEC11Q9BWP8 271 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 MAK16Q9BXY0 300 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CIPCQ9C0C6 399 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms