RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 CERS2Q96G23 380 aa13.77□□□□□ -0.21
USP42-206ENST00000479544 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.21
USP42-206ENST00000479544 SORCS3Q9UPU3 1222 aa13.77□□□□□ -0.21
USP42-206ENST00000479544 MYO18AQ92614 2054 aaKnown RBP13.76□□□□□ -0.21
USP42-206ENST00000479544 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 BUD23O43709 281 aaKnown RBP13.76□□□□□ -0.21
USP42-206ENST00000479544 C2P06681 752 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 GABRB2P47870 512 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 SERPINB10P48595 397 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 HSD17B4P51659 736 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 ZNF470Q6ECI4 717 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 PRDM12Q9H4Q4 367 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 J3QRK9 145 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 RGS5O15539 181 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 GOT1P17174 413 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 THOP1P52888 689 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 OGDHQ02218 1023 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 SIX1Q15475 284 aaPredicted RBP13.76□□□□□ -0.21
USP42-206ENST00000479544 EGFLAMQ63HQ2 1017 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 BRSK2Q8IWQ3 736 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 FBXL8Q96CD0 374 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 C17orf80Q9BSJ5 609 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 RRAGCQ9HB90 399 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 SYBUQ9NX95 663 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 BOLA2-SMG1P6H3BVE0 249 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 CAPN15O75808 1086 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 FKBP9O95302 570 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 HMBSP08397 361 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 HOXA10P31260 410 aaPredicted RBP13.76□□□□□ -0.21
USP42-206ENST00000479544 IDH3AP50213 366 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 DMC1Q14565 340 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 SLC9A4Q6AI14 798 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 PAOXQ6QHF9 649 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 XKR5Q6UX68 686 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 FAM183BPQ6ZVS7 135 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 FKBP9P1Q75LS8 142 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 SLC41A1Q8IVJ1 513 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 PTTG2Q9NZH5 202 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 TK2O00142 265 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 CHRNGP07510 517 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 LAMTOR4Q0VGL1 99 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 SAMD7Q7Z3H4 446 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 LZICQ8WZA0 190 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 POMKQ9H5K3 350 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 COQ10BQ9H8M1 238 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 GIMAP4Q9NUV9 329 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 XPR1Q9UBH6 696 aa13.76□□□□□ -0.21
USP42-206ENST00000479544 E5RI56 91 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 OAS1P00973 400 aaKnown RBP13.75□□□□□ -0.21
USP42-206ENST00000479544 ERBB2P04626 1255 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 PGAM1P18669 254 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 CDH3P22223 829 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 TRIM25Q14258 630 aaKnown RBP13.75□□□□□ -0.21
USP42-206ENST00000479544 CCDC153Q494R4 210 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 FBXO48Q5FWF7 155 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 ARL13AQ5H913 290 aaPredicted RBP13.75□□□□□ -0.21
USP42-206ENST00000479544 NAPEPLDQ6IQ20 393 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 LPGAT1Q92604 370 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 COL20A1Q9P218 1284 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 SEPT3Q9UH03 358 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 RREB1Q92766 1687 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 A0A087WZ62 844 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 PLIN3O60664 434 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 DNAJA2O60884 412 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 PGK2P07205 417 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 RGS21Q2M5E4 152 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 IER5Q5VY09 327 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 MPZL3Q6UWV2 235 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 C15orf52Q6ZUT6 534 aaKnown RBP13.75□□□□□ -0.21
USP42-206ENST00000479544 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 ITFG2Q969R8 447 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 FDXACB1Q9BRP7 624 aaPredicted RBP13.75□□□□□ -0.21
USP42-206ENST00000479544 ADAMTS6Q9UKP5 1117 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 TOR1BO14657 336 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 IRF6O14896 467 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 B4GALT5O43286 388 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 NFICP08651 508 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 PGGT1BP53609 377 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 RAD23AP54725 363 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 IL5RAQ01344 420 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
USP42-206ENST00000479544 CHSY1Q86X52 802 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 DENND1AQ8TEH3 1009 aa13.75□□□□□ -0.21
USP42-206ENST00000479544 ZFAND2BQ8WV99 257 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms