RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 VANGL2Q9ULK5 521 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 STAP1Q9ULZ2 295 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 C17orf102A2RUQ5 167 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 PPP1R12AO14974 1030 aaPredicted RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 ANPEPP15144 967 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SP100P23497 879 aaPredicted RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 AVPR1AP37288 418 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 CRYBB1P53674 252 aaPredicted RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 TCHHL1Q5QJ38 904 aaPredicted RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 RAPH1Q70E73 1250 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 BHLHA9Q7RTU4 235 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 SCAMP5Q8TAC9 235 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 TUBB6Q9BUF5 446 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 COLEC11Q9BWP8 271 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 IARS2Q9NSE4 1012 aaKnown RBP11.05□□□□□ -0.64
VPS52-217ENST00000478934 TMLHEQ9NVH6 421 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 OR12D3Q9UGF7 316 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 FBXW11Q9UKB1 542 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 ST3GAL5Q9UNP4 418 aa11.05□□□□□ -0.64
VPS52-217ENST00000478934 HAS3O00219 553 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 ZNF195O14628 629 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 MAP3K7O43318 606 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 SIN3BO75182 1162 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GLRA3O75311 464 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 TM7SF2O76062 418 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 LRIG2O94898 1065 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 POMCP01189 267 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 RALBP11234 206 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 BDNFP23560 247 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 BRCC3P46736 316 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GLRBP48167 497 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 PSEN1P49768 467 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 SEMA3BQ13214 749 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 ZNF460Q14592 562 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 FAM110CQ1W6H9 321 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 ANKRD20A4Q4UJ75 823 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 RABGAP1LQ5R372 815 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 CCNJLQ8IV13 435 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 ZNF781Q8N8C0 355 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 MAPK15Q8TD08 544 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 KCTD13Q8WZ19 329 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 C20orf96Q9NUD7 363 aaPredicted RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 IGSF9Q9P2J2 1179 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 A0A088AWK7 358 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GOLGA8QA0A0J9YX86 632 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GOLGA8OA6NCC3 632 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 HHLA1C9JL84 531 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 E9PBE3 544 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GOLGA8NF8WBI6 632 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 PHGDHO43175 533 aaKnown RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 KLHL41O60662 606 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 AP2A1O95782 977 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 MT-CYBP00156 380 aaPredicted RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 SERPINA6P08185 405 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 CPOXP36551 454 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GP5P40197 560 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 TIGD5Q53EQ6 642 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 FOXB2Q5VYV0 432 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 SPRYD7Q5W111 196 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 LPCAT4Q643R3 524 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 RWDD4Q6NW29 188 aaKnown RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 CYS1Q717R9 158 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 CNTD1Q8N815 330 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 ATXN3LQ9H3M9 355 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 EIF2B3Q9NR50 452 aaKnown RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 NDFIP2Q9NV92 336 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 RCOR3Q9P2K3 495 aaPredicted RBP11.04□□□□□ -0.64
VPS52-217ENST00000478934 DCDC2Q9UHG0 476 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 CDY2AQ9Y6F7 541 aa11.04□□□□□ -0.64
VPS52-217ENST00000478934 A0A096LPK6 155 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 GLTPD2A6NH11 291 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 XPOTO43592 962 aaKnown RBP11.03□□□□□ -0.64
VPS52-217ENST00000478934 SMIM24O75264 130 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 SERPINE1P05121 402 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 CHRNGP07510 517 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 CPA3P15088 417 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 AXLP30530 894 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 LRPAP1P30533 357 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 MSX2P35548 267 aaPredicted RBP11.03□□□□□ -0.64
VPS52-217ENST00000478934 ATXN3P54252 364 aaPredicted RBP11.03□□□□□ -0.64
VPS52-217ENST00000478934 SLC9B1Q4ZJI4 515 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 CXCL17Q6UXB2 119 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 RNF111Q6ZNA4 994 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 WDR75Q8IWA0 830 aaKnown RBP11.03□□□□□ -0.64
VPS52-217ENST00000478934 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
VPS52-217ENST00000478934 PPFIBP2Q8ND30 876 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
VPS52-217ENST00000478934 RBBP8Q99708 897 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 APBA2Q99767 749 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 WDCPQ9H6R7 721 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 SLC39A10Q9ULF5 831 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 LRCH1Q9Y2L9 728 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
VPS52-217ENST00000478934 ARL5CA6NH57 179 aa11.03□□□□□ -0.64
VPS52-217ENST00000478934 G3V2L1 256 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms