RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 VCPIP1Q96JH7 1222 aa17.72■□□□□ 0.43
VIM-204ENST00000478746 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
VIM-204ENST00000478746 RNGTTO60942 597 aaKnown RBP17.71■□□□□ 0.43
VIM-204ENST00000478746 THEGLP0DJG4 465 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 ALPPL2P10696 532 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 NUMBP49757 651 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 DUSP3P51452 185 aaPredicted RBP17.71■□□□□ 0.43
VIM-204ENST00000478746 SULT2A1Q06520 285 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 CNTN1Q12860 1018 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 SLC12A1Q13621 1099 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 LCLAT1Q6UWP7 414 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 CLEC4CQ8WTT0 213 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 FRS2Q8WU20 508 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 SLC39A13Q96H72 371 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 SERPINB11Q96P15 392 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 ASCL3Q9NQ33 180 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 USP25Q9UHP3 1055 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 SARDHQ9UL12 918 aa17.71■□□□□ 0.43
VIM-204ENST00000478746 SLC31A1O15431 190 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 PIAS2O75928 621 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 FBXO21O94952 628 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 RHOBTB3O94955 611 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 GP1BAP07359 652 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 MYF5P13349 255 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 ZNF18P17022 549 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 RBMS1P29558 406 aaKnown RBP17.7■□□□□ 0.42
VIM-204ENST00000478746 ACCSLQ4AC99 568 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 AGBL4Q5VU57 503 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 GUF1Q8N442 669 aaKnown RBP17.7■□□□□ 0.42
VIM-204ENST00000478746 DQX1Q8TE96 717 aaKnown RBP17.7■□□□□ 0.42
VIM-204ENST00000478746 APOLD1Q96LR9 279 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 MYOCQ99972 504 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 MIS12Q9H081 205 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 EVA1BQ9NVM1 165 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 TJP2Q9UDY2 1190 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 XPO7Q9UIA9 1087 aaKnown RBP17.7■□□□□ 0.42
VIM-204ENST00000478746 SSUH2Q9Y2M2 353 aa17.7■□□□□ 0.42
VIM-204ENST00000478746 NYNRINQ9P2P1 1898 aaKnown RBP17.69■□□□□ 0.42
VIM-204ENST00000478746 A0A1B0GVL5 298 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 NEMP2A6NFY4 417 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 C1QTNF3-AMACRE9PGA6 284 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 K7ENP7 123 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 FYNP06241 537 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 GIMD1P0DJR0 217 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 EPB41P11171 864 aaKnown RBP17.69■□□□□ 0.42
VIM-204ENST00000478746 PDGFRAP16234 1089 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 NNTQ13423 1086 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 CNGA2Q16280 664 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 TCERG1LQ5VWI1 586 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 KIAA1614Q5VZ46 1190 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 RAP1GAP2Q684P5 730 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 INO80CQ6PI98 192 aaPredicted RBP17.69■□□□□ 0.42
VIM-204ENST00000478746 CHSY1Q86X52 802 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 TMEM145Q8NBT3 493 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 MAPK15Q8TD08 544 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 TFAP2BQ92481 460 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 KLK6Q92876 244 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 CCDC97Q96F63 343 aaPredicted RBP17.69■□□□□ 0.42
VIM-204ENST00000478746 HSFY1Q96LI6 401 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.69■□□□□ 0.42
VIM-204ENST00000478746 CALN1Q9BXU9 219 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 PREBQ9HCU5 417 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 NLGN3Q9NZ94 848 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 CFAP45Q9UL16 551 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 NAALADL1Q9UQQ1 740 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
VIM-204ENST00000478746 APOEP02649 317 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 PAEPP09466 180 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 KRT10P13645 584 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 PRLRP16471 622 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 TACR2P21452 398 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 PLK1P53350 603 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 ISXQ2M1V0 245 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 C3orf38Q5JPI3 329 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 ATL3Q6DD88 541 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 IGF2-ASQ6U949 168 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 SLC46A1Q96NT5 459 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 USP29Q9HBJ7 922 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 RCOR1Q9UKL0 485 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 SATB2Q9UPW6 733 aa17.68■□□□□ 0.42
VIM-204ENST00000478746 M0QYV0 167 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 MCF2LO15068 1137 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 SCAMP1O15126 338 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 CETN3O15182 167 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 PFKFB1P16118 471 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
VIM-204ENST00000478746 AKT2P31751 481 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 CSRP3P50461 194 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 VASPP50552 380 aaPredicted RBP17.67■□□□□ 0.42
VIM-204ENST00000478746 TAS2R38P59533 333 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 LRMPQ12912 555 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 DLG2Q15700 870 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 EDRF1Q3B7T1 1238 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 ZCWPW2Q504Y3 356 aa17.67■□□□□ 0.42
VIM-204ENST00000478746 ZC3H12AQ5D1E8 599 aaKnown RBP17.67■□□□□ 0.42
VIM-204ENST00000478746 NEK5Q6P3R8 708 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms