RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CKAP5Q14008 2032 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 hCG_1818297A0A087WSY0 165 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 ENC1O14682 589 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 MFSD11O43934 449 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 RAMP2O60895 175 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 KAT7O95251 611 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 CD72P21854 359 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 IL4RP24394 825 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 SERPINB6P35237 376 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 CETN2P41208 172 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 NUMBP49757 651 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 LLGL1Q15334 1064 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 GEN1Q17RS7 908 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 SEL1L2Q5TEA6 688 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 RNF219Q5W0B1 726 aaPredicted RBP15.71■□□□□ 0.11
SEC13-215ENST00000477547 KAZNQ674X7 775 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 NCBP2-AS2Q69YL0 99 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 ZNF852Q6ZMS4 543 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 RNF157Q96PX1 679 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 TBC1D17Q9HA65 648 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 ETNK2Q9NVF9 386 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 VPS28Q9UK41 221 aa15.71■□□□□ 0.11
SEC13-215ENST00000477547 ILVBLA1L0T0 632 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 SHISA7A6NL88 538 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 KCNK3O14649 394 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 APOL1O14791 398 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 CISD3P0C7P0 127 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 KRT10P13645 584 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 MZF1P28698 734 aaPredicted RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 DEKP35659 375 aaKnown RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 ETFBP38117 255 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 GRIA2P42262 883 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 GALK1P51570 392 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 COPS2P61201 443 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 DYNLT1P63172 113 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 GNA12Q03113 381 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 GRSF1Q12849 480 aaKnown RBP eCLIP15.7■□□□□ 0.1
SEC13-215ENST00000477547 SLC12A1Q13621 1099 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 TAZQ16635 292 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 PLEKHG6Q3KR16 790 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 TMEM196Q5HYL7 178 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 PITRM1Q5JRX3 1037 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 FSTL4Q6MZW2 842 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 AADACL2Q6P093 401 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 ZNF783Q6ZMS7 281 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 SFTPA1Q8IWL2 248 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 UMODL1-AS1Q8N2C9 162 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 PQLC3Q8N755 202 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 OR7D4Q8NG98 312 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 RMDN1Q96DB5 314 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 CELF6Q96J87 481 aaKnown RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 LMLNQ96KR4 655 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 C16orf45Q96MC5 204 aaPredicted RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 WDR24Q96S15 920 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 MAK16Q9BXY0 300 aaKnown RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 CIPCQ9C0C6 399 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 CARD9Q9H257 536 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 MFSD1Q9H3U5 465 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 NOL6Q9H6R4 1146 aaKnown RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 MRPS17Q9Y2R5 130 aaKnown RBP15.7■□□□□ 0.1
SEC13-215ENST00000477547 ANKRD36A6QL64 1941 aa15.7■□□□□ 0.1
SEC13-215ENST00000477547 A0A0D9SEW6 157 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 TBC1D3BA6NDS4 549 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 EGFP01133 1207 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 PYGMP11217 842 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 DRD1P21728 446 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 PTPN7P35236 360 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 STARD6P59095 220 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 TFDP2Q14188 446 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 DMC1Q14565 340 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 UBXN2BQ14CS0 331 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 EIF4HQ15056 248 aaKnown RBP15.69■□□□□ 0.1
SEC13-215ENST00000477547 PARP15Q460N3 678 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 SLC9A4Q6AI14 798 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 NUDT18Q6ZVK8 323 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 ZNF354CQ86Y25 554 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 APCDD1Q8J025 514 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 LZTR1Q8N653 840 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 PLD5Q8N7P1 536 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 DCAF4L2Q8NA75 395 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 OSBPL8Q9BZF1 889 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 FOXQ1Q9C009 403 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 KLC2Q9H0B6 622 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 FBRSL1Q9HCM7 1045 aaKnown RBP15.69■□□□□ 0.1
SEC13-215ENST00000477547 ATP13A1Q9HD20 1204 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 LTB4R2Q9NPC1 389 aa15.69■□□□□ 0.1
SEC13-215ENST00000477547 INTS6Q9UL03 887 aaKnown RBP15.69■□□□□ 0.1
SEC13-215ENST00000477547 KANSL1LA0AUZ9 987 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 RASA4BC9J798 803 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 PRRT4C9JH25 899 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 DFFAO00273 331 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 RASA4O43374 803 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 PI15O43692 258 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 CST8O60676 142 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 KRT37O76014 449 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 ZFXP17010 805 aaPredicted RBP15.68■□□□□ 0.1
SEC13-215ENST00000477547 TARSP26639 723 aaKnown RBP15.68■□□□□ 0.1
SEC13-215ENST00000477547 ACVRL1P37023 503 aa15.68■□□□□ 0.1
SEC13-215ENST00000477547 NDST2P52849 883 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms