RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 TRMT11Q7Z4G4 463 aaKnown RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 SPC24Q8NBT2 197 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 UCMAQ8WVF2 138 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 ZYG11BQ9C0D3 744 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 IRF2BPLQ9H1B7 796 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 POLMQ9NP87 494 aaPredicted RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 VPS51Q9UID3 782 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 ANAPC7Q9UJX3 599 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 VPS28Q9UK41 221 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 AP4E1Q9UPM8 1137 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 IGHV1OR15-9A0A0B4J2B8 117 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 CCDC163A0A0D9SF12 145 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 ANKRD62A6NC57 917 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 SOWAHDA6NJG2 315 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 PLK4O00444 970 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 TIMM44O43615 452 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 AKR1B10O60218 316 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 ZMPSTE24O75844 475 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 MYBL1P10243 752 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 TGM1P22735 817 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 OR1E1P30953 314 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 SLC25A11Q02978 314 aaKnown RBP12.76□□□□□ -0.37
APTX-220ENST00000476858 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 SDE2Q6IQ49 451 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 ZC3H14Q6PJT7 736 aaKnown RBP12.76□□□□□ -0.37
APTX-220ENST00000476858 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 CEP68Q76N32 757 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 ARMCX6Q7L4S7 300 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 TMPRSS6Q8IU80 811 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 CNGA4Q8IV77 575 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 STK40Q8N2I9 435 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 CCDC26Q8TAB7 109 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 FRS2Q8WU20 508 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 VOPP1Q96AW1 172 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 TBC1D31Q96DN5 1066 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 MUC3BQ9H195 1237 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 DHX35Q9H5Z1 703 aaKnown RBP12.76□□□□□ -0.37
APTX-220ENST00000476858 ZWILCHQ9H900 591 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 KLHL11Q9NVR0 708 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 PPARGC1AQ9UBK2 798 aaKnown RBP12.76□□□□□ -0.37
APTX-220ENST00000476858 SERGEFQ9UGK8 458 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 PLA2G4CQ9UP65 541 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 REXO2Q9Y3B8 237 aaKnown RBP12.76□□□□□ -0.37
APTX-220ENST00000476858 SCINQ9Y6U3 715 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
APTX-220ENST00000476858 ABCA7Q8IZY2 2146 aa12.76□□□□□ -0.37
APTX-220ENST00000476858 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 TMEM110-MUSTN1A8MSY1 372 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 ZNF821O75541 412 aaPredicted RBP12.75□□□□□ -0.37
APTX-220ENST00000476858 ATP5BP06576 529 aaKnown RBP12.75□□□□□ -0.37
APTX-220ENST00000476858 CD48P09326 243 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 SRCP12931 536 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 RHOQP17081 205 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 GOT1P17174 413 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 L1CAMP32004 1257 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 PTGER3P43115 390 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 RPS14P62263 151 aaKnown RBP12.75□□□□□ -0.37
APTX-220ENST00000476858 ARF5P84085 180 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 GNA12Q03113 381 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 HNRNPA1L2Q32P51 320 aaKnown RBP12.75□□□□□ -0.37
APTX-220ENST00000476858 ARL13BQ3SXY8 428 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 EFHC2Q5JST6 749 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 FAM182AQ5T1J6 154 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 PPP1R2P3Q6NXS1 205 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 RAD9BQ6WBX8 426 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 Q6ZVU0 165 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 FAM124AQ86V42 546 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 TMEFF1Q8IYR6 380 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 NPWQ8N729 165 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 ZNF564Q8TBZ8 553 aaPredicted RBP12.75□□□□□ -0.37
APTX-220ENST00000476858 TRIM11Q96F44 468 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 SPON2Q9BUD6 331 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 DEF6Q9H4E7 631 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 PRDM16Q9HAZ2 1276 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 ETNK2Q9NVF9 386 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 TMEM248Q9NWD8 314 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 CTTNBP2NLQ9P2B4 639 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 SARDHQ9UL12 918 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 USP18Q9UMW8 372 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 HYOU1Q9Y4L1 999 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 SLCO1B1Q9Y6L6 691 aa12.75□□□□□ -0.37
APTX-220ENST00000476858 OTOGLQ3ZCN5 2332 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ZNF292O60281 2723 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 SYNCRIPO60506 623 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ASLP04424 464 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 H2AFZP0C0S5 128 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 RARAP10276 462 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms