RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TLK1Q9UKI8 766 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 NCANO14594 1321 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 KDM3AQ9Y4C1 1321 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 TEX22C9J3V5 150 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 PER2O15055 1255 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 TNFSF14O43557 240 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 CHRM5P08912 532 aaPredicted RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 CYP2A6P11509 494 aaPredicted RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 GPD1P21695 349 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 CD72P21854 359 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 BUD31P41223 144 aaPredicted RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 CLK3P49761 638 aaKnown RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 CDH15P55291 814 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 COL10A1Q03692 680 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 GOLGA8FQ08AF8 430 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 IL13RA2Q14627 380 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 NAA25Q14CX7 972 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 PROSER3Q2NL68 480 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 ZXDCQ2QGD7 858 aaPredicted RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 SLC45A4Q5BKX6 768 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 ARL13AQ5H913 290 aaPredicted RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 CC2D1BQ5T0F9 858 aaKnown RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 DHRS13Q6UX07 377 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 SETD9Q8NE22 299 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 NCSTNQ92542 709 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 IP6K1Q92551 441 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 ADAD1Q96M93 576 aaKnown RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 EPHX3Q9H6B9 360 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 TTC12Q9H892 705 aaPredicted RBP6.48□□□□□ -1.37
VPS50-212ENST00000476413 SEMA4GQ9NTN9 838 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 ARL8BQ9NVJ2 186 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 ARL15Q9NXU5 204 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 FBXO4Q9UKT5 387 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 CAMK2AQ9UQM7 478 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 EMSYQ7Z589 1322 aa6.48□□□□□ -1.37
VPS50-212ENST00000476413 KCNJ18B7U540 433 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 PRRG2O14669 202 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 PAFAH1B1P43034 410 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 PTH2RP49190 550 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 TFF2Q03403 129 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 ERV3-1Q14264 604 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 SLC18A3Q16572 532 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 PFKFB3Q16875 520 aaPredicted RBP6.47□□□□□ -1.37
VPS50-212ENST00000476413 FBXO43Q4G163 708 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 AKNAD1Q5T1N1 836 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 HAUS3Q68CZ6 603 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 CFAP161Q6P656 301 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 RBM44Q6ZP01 1051 aaKnown RBP6.47□□□□□ -1.37
VPS50-212ENST00000476413 C4orf50Q6ZRC1 276 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 TMTC3Q6ZXV5 915 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 PLD5Q8N7P1 536 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 KCNG4Q8TDN1 519 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 ZNF764Q96H86 408 aaPredicted RBP6.47□□□□□ -1.37
VPS50-212ENST00000476413 NR1H4Q96RI1 486 aaPredicted RBP6.47□□□□□ -1.37
VPS50-212ENST00000476413 MPHOSPH8Q99549 860 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 NPLQ9BXD5 320 aaPredicted RBP6.47□□□□□ -1.37
VPS50-212ENST00000476413 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 PPP1R14DQ9NXH3 145 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 HCN3Q9P1Z3 774 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 OSGIN2Q9Y236 505 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 WNT6Q9Y6F9 365 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 AOX1Q06278 1338 aa6.47□□□□□ -1.37
VPS50-212ENST00000476413 TDRD9Q8NDG6 1382 aaKnown RBP6.46□□□□□ -1.37
VPS50-212ENST00000476413 A0A1W2PQM1 296 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 UBE2Q2LH0YL09 131 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 SMIM22K7EJ46 135 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 FZD7O75084 574 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 RNASEH2AO75792 299 aaKnown RBP6.46□□□□□ -1.38
VPS50-212ENST00000476413 COL11A2P13942 1736 aaPredicted RBP6.46□□□□□ -1.38
VPS50-212ENST00000476413 AKR1A1P14550 325 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 ST6GAL1P15907 406 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 GSTM2P28161 218 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 HOXA7P31268 230 aaPredicted RBP6.46□□□□□ -1.38
VPS50-212ENST00000476413 PTPN9P43378 593 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 OAZ1P54368 228 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 ZNF667Q5HYK9 610 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 C17orf99Q6UX52 265 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 NEK8Q86SG6 692 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 SCAIQ8N9R8 606 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 FAM98AQ8NCA5 519 aaKnown RBP6.46□□□□□ -1.38
VPS50-212ENST00000476413 BARD1Q99728 777 aaKnown RBP6.46□□□□□ -1.38
VPS50-212ENST00000476413 PLEKHA5Q9HAU0 1116 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 SARDHQ9UL12 918 aa6.46□□□□□ -1.38
VPS50-212ENST00000476413 TCRBV7S3A2A0A539 114 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 TMEM232C9JQI7 657 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 LDLRAD4O15165 306 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 TGFB1I1O43294 461 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 CCNT1O60563 726 aaKnown RBP6.45□□□□□ -1.38
VPS50-212ENST00000476413 CHRM4P08173 479 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 ACVRL1P37023 503 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 POLD2P49005 469 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 HARS2P49590 506 aaKnown RBP6.45□□□□□ -1.38
VPS50-212ENST00000476413 YPEL5P62699 121 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 KLF10Q13118 480 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 TBCEQ15813 527 aaPredicted RBP6.45□□□□□ -1.38
VPS50-212ENST00000476413 KIAA1755Q5JYT7 1200 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 PRAMEF17Q5VTA0 474 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 SNX30Q5VWJ9 437 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 AADACL2Q6P093 401 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 MRGPRGQ86SM5 289 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms