RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 NUCB2P80303 420 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 CCDC40Q4G0X9 1142 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 ZC3H12AQ5D1E8 599 aaKnown RBP18.38■□□□□ 0.53
PCGF3-209ENST00000475288 FAM46CQ5VWP2 391 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 TBC1D3GQ6DHY5 549 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 TBC1D3CQ6IPX1 549 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 LRRC69Q6ZNQ3 347 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 SPATS2Q86XZ4 545 aaKnown RBP18.38■□□□□ 0.53
PCGF3-209ENST00000475288 TBC1D3Q8IZP1 549 aaPredicted RBP18.38■□□□□ 0.53
PCGF3-209ENST00000475288 CCAR2Q8N163 923 aaKnown RBP18.38■□□□□ 0.53
PCGF3-209ENST00000475288 ATP6V0D2Q8N8Y2 350 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 BAP1Q92560 729 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 DCBLD2Q96PD2 775 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 SLC12A6Q9UHW9 1150 aa18.38■□□□□ 0.53
PCGF3-209ENST00000475288 RRP8O43159 456 aaKnown RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 MED7O43513 233 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 TLX3O43711 291 aaPredicted RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 ATP9BO43861 1147 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 RNGTTO60942 597 aaKnown RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 STK19P49842 368 aaPredicted RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 RABGAP1LQ5R372 815 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 SMYD5Q6GMV2 418 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 CXorf57Q6NSI4 855 aaKnown RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 RRAGAQ7L523 313 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 ARHGEF19Q8IW93 802 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 ELOA2Q8IYF1 753 aaPredicted RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 EHBP1Q8NDI1 1231 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 PIP4K2CQ8TBX8 421 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 ERCC4Q92889 916 aaPredicted RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 KREMEN1Q96MU8 473 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 HELZ2Q9BYK8 2649 aaKnown RBP18.37■□□□□ 0.53
PCGF3-209ENST00000475288 MYLKQ15746 1914 aa18.37■□□□□ 0.53
PCGF3-209ENST00000475288 E5RJQ4 531 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 CALCAP01258 141 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 GLI1P08151 1106 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 VAV1P15498 845 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 MARSP56192 900 aaKnown RBP18.36■□□□□ 0.53
PCGF3-209ENST00000475288 BNIP3Q12983 259 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 PROX2Q3B8N5 592 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 SETMARQ53H47 684 aaPredicted RBP18.36■□□□□ 0.53
PCGF3-209ENST00000475288 AGBL4Q5VU57 503 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 TTI2Q6NXR4 508 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 DENND1BQ6P3S1 775 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 DCBLD1Q8N8Z6 715 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 OR8D1Q8WZ84 308 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 ALG14Q96F25 216 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 PREBQ9HCU5 417 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 ASNSD1Q9NWL6 643 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 PPM1HQ9ULR3 514 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 AK5Q9Y6K8 562 aa18.36■□□□□ 0.53
PCGF3-209ENST00000475288 ARID1BQ8NFD5 2236 aaPredicted RBP18.35■□□□□ 0.53
PCGF3-209ENST00000475288 C1QTNF3-AMACRE9PGA6 284 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 PRAMEF26H0Y7S4 382 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 MCF2LO15068 1137 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 ATXN7O15265 892 aaPredicted RBP18.35■□□□□ 0.53
PCGF3-209ENST00000475288 GNA14O95837 355 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 ITPKBP27987 946 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 CCR1P32246 355 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 CLDN6P56747 220 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 E2F1Q01094 437 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 SEMG2Q02383 582 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 ZNF211Q13398 564 aaPredicted RBP18.35■□□□□ 0.53
PCGF3-209ENST00000475288 ENOSF1Q7L5Y1 443 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 TRIM59Q8IWR1 403 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 ZNF606Q8WXB4 792 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 SLC25A13Q9UJS0 675 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 SARDHQ9UL12 918 aa18.35■□□□□ 0.53
PCGF3-209ENST00000475288 RTN2O75298 545 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 CD44P16070 742 aaKnown RBP18.34■□□□□ 0.53
PCGF3-209ENST00000475288 C19orf57Q0VDD7 668 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 KCNH2Q12809 1159 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 STAT4Q14765 748 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 FBXL22Q6P050 247 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 NEK5Q6P3R8 708 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 TMEM145Q8NBT3 493 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 FGF11Q92914 225 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 SLC2A13Q96QE2 648 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 FEM1AQ9BSK4 669 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 CLCA2Q9UQC9 943 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 OR51B4Q9Y5P0 310 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 ASXL3Q9C0F0 2248 aa18.34■□□□□ 0.53
PCGF3-209ENST00000475288 SHROOM3Q8TF72 1996 aa18.33■□□□□ 0.53
PCGF3-209ENST00000475288 PTPRQQ9UMZ3 2332 aa18.33■□□□□ 0.53
PCGF3-209ENST00000475288 BICDL2A1A5D9 508 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 GOLGA6L4A6NEF3 574 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.52
PCGF3-209ENST00000475288 KRT5P13647 590 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 METAP1P53582 386 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 PITX1P78337 314 aaPredicted RBP18.33■□□□□ 0.52
PCGF3-209ENST00000475288 CDK17Q00537 523 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 INSM1Q01101 510 aaPredicted RBP18.33■□□□□ 0.52
PCGF3-209ENST00000475288 CNTN1Q12860 1018 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 PDCLQ13371 301 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 C5orf22Q49AR2 442 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 SLC39A7Q92504 469 aa18.33■□□□□ 0.52
PCGF3-209ENST00000475288 FAM204AQ9H8W3 233 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms