RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RHOCP08134 193 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 NRLP54845 237 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 YBEYP58557 167 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-206ENST00000474828 CCZ1BP86790 482 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 CCZ1P86791 482 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-206ENST00000474828 GNA12Q03113 381 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 HADHQ16836 314 aaKnown RBP17.37■□□□□ 0.37
SCAF11-206ENST00000474828 KCNT1Q5JUK3 1230 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 RNF219Q5W0B1 726 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-206ENST00000474828 C11orf63Q6NUN7 778 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 ZNF662Q6ZS27 426 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 RFX8Q6ZV50 586 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 WDR5BQ86VZ2 330 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 ACRBPQ8NEB7 543 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
SCAF11-206ENST00000474828 LRRC19Q9H756 370 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 CATSPERBQ9H7T0 1116 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 PCDH18Q9HCL0 1135 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 POLR3BQ9NW08 1133 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-206ENST00000474828 CACNA2D2Q9NY47 1150 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 PLA2G4CQ9UP65 541 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 SLC8A2Q9UPR5 921 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 PCDHGA2Q9Y5H1 932 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 ADGRG1Q9Y653 693 aa17.37■□□□□ 0.37
SCAF11-206ENST00000474828 MYO15AQ9UKN7 3530 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 WASH3PC4AMC7 463 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 ATP9BO43861 1147 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 BUB1BO60566 1050 aaPredicted RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 APBB3O95704 486 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 KRT7P08729 469 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 HOXB2P14652 356 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 GOT1P17174 413 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 PRKCHP24723 683 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 ETFBP38117 255 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 CTSOP43234 321 aaPredicted RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 CSTF1Q05048 431 aaKnown RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 MESDQ14696 234 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 HNRNPA1L2Q32P51 320 aaKnown RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 SDE2Q6IQ49 451 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 RWDD4Q6NW29 188 aaKnown RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 METTL3Q86U44 580 aaKnown RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 TPCN2Q8NHX9 752 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 FRS2Q8WU20 508 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 CYB5D2Q8WUJ1 264 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 C2orf49Q9BVC5 232 aaPredicted RBP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 ZDHHC4Q9NPG8 344 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAF11-206ENST00000474828 ZSCAN32Q9NX65 697 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 DUSP10Q9Y6W6 482 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 CKAP5Q14008 2032 aa17.36■□□□□ 0.37
SCAF11-206ENST00000474828 FANCMQ8IYD8 2048 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 MYO18AQ92614 2054 aaKnown RBP17.35■□□□□ 0.37
SCAF11-206ENST00000474828 EEF2KO00418 725 aaKnown RBP17.35■□□□□ 0.37
SCAF11-206ENST00000474828 DCLK1O15075 740 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 CREB3O43889 395 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 CD160O95971 181 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 NDST2P52849 883 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 TPI1P60174 286 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 SLC20A2Q08357 652 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 PDK2Q15119 407 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 TAZQ16635 292 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 SMTNL2Q2TAL5 461 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 PARP15Q460N3 678 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 KIAA1211LQ6NV74 962 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 TSSK4Q6SA08 328 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 LONP2Q86WA8 852 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 CSPG4P5Q96PW8 444 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 ZWILCHQ9H900 591 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 FBRSQ9HAH7 460 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 POLMQ9NP87 494 aaPredicted RBP17.35■□□□□ 0.37
SCAF11-206ENST00000474828 VPS51Q9UID3 782 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 VPS28Q9UK41 221 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 ALG6Q9Y672 507 aa17.35■□□□□ 0.37
SCAF11-206ENST00000474828 TARSL2A2RTX5 802 aaKnown RBP17.34■□□□□ 0.37
SCAF11-206ENST00000474828 PROB1E7EW31 1015 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 H0Y858 1186 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 H3BRJ5 948 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 RAMP2O60895 175 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 ERCC2P18074 760 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 CNR2P34972 360 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 NBL1P41271 181 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 CLCN6P51797 869 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 COPAP53621 1224 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 DMWDQ09019 674 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 GSE1Q14687 1217 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 ATP13A4Q4VNC1 1196 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 SERPINA13PQ6UXR4 307 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 ARHGAP12Q8IWW6 846 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 TXLNBQ8N3L3 684 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 SH2D3CQ8N5H7 860 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 LZTR1Q8N653 840 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 LRRC57Q8N9N7 239 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 OR7D4Q8NG98 312 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 PHOX2BQ99453 314 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 ZNF670Q9BS34 389 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 MUC3BQ9H195 1237 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 SUN2Q9UH99 717 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms