RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MFHAS1Q9Y4C4 1052 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 OR51B4Q9Y5P0 310 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 ALG6Q9Y672 507 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 DMXL2Q8TDJ6 3036 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 WDFY3Q8IZQ1 3526 aa7.2□□□□□ -1.26
LIMD1-204ENST00000474665 RALGAPA1Q6GYQ0 2036 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 MACROD2A1Z1Q3 448 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 USP27XA6NNY8 438 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 F5H5T6 163 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 AXIN1O15169 862 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 PRPSAP2O60256 369 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 FOXD2O60548 495 aaPredicted RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 SRGAP2O75044 1071 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 RNF8O76064 485 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 LUC7L3O95232 432 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 KAT7O95251 611 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 MOCS3O95396 460 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 MZF1P28698 734 aaPredicted RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 EIF2DP41214 584 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 NOP2P46087 812 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 NUMBP49757 651 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 KRT83P78385 493 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 KDSRQ06136 332 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 CCDC173Q0VFZ6 552 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 LMAN2Q12907 356 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 NR1H3Q13133 447 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 MMRN1Q13201 1228 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 DPYSQ14117 519 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 DPYSL2Q16555 572 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 GEN1Q17RS7 908 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 BOLA3Q53S33 107 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 C11orf63Q6NUN7 778 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF662Q6ZS27 426 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 Q6ZS52 159 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 CHST9Q7L1S5 443 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 POLNQ7Z5Q5 900 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 TFAP2DQ7Z6R9 452 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 KIAA1328Q86T90 577 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ADIPOR2Q86V24 386 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 PROSER1Q86XN7 944 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 TP53INP2Q8IXH6 220 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 TERB1Q8NA31 727 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 FIBINQ8TAL6 211 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 HNRNPLLQ8WVV9 542 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 TEKT4Q8WW24 435 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 SORCS1Q8WY21 1168 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 FAM3CQ92520 227 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 RAPGEF5Q92565 580 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 KRT35Q92764 455 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 CLDN23Q96B33 292 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 RPRD1AQ96P16 312 aaPredicted RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 PNKPQ96T60 521 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 SLC2A11Q9BYW1 496 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 OSBPL6Q9BZF3 934 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ARRDC1-AS1Q9H2J1 176 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 SMOC1Q9H4F8 434 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 DHX35Q9H5Z1 703 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ZWILCHQ9H900 591 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 PCDH18Q9HCL0 1135 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ZDHHC4Q9NPG8 344 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ABCB8Q9NUT2 735 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 ETNK2Q9NVF9 386 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 DNAJC17Q9NVM6 304 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 KLHL11Q9NVR0 708 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM51Q9NW97 253 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 CWC15Q9P013 229 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 PPARGC1AQ9UBK2 798 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 SLC12A6Q9UHW9 1150 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 NDRG2Q9UN36 371 aaKnown RBP7.19□□□□□ -1.26
LIMD1-204ENST00000474665 TBC1D30Q9Y2I9 924 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 CAPN6Q9Y6Q1 641 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 DOCK9Q9BZ29 2069 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 EML5Q05BV3 1969 aa7.19□□□□□ -1.26
LIMD1-204ENST00000474665 A0A0D9SEW6 157 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 A0A1B0GVM2 712 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 TCAF2A6NFQ2 919 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 MAN2B1O00754 1011 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 DCLK1O15075 740 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 HYAL3O43820 417 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CREB3O43889 395 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 PALMO75781 387 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 C1QL1O75973 258 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 IPO7O95373 1038 aaKnown RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CCDC175P0C221 793 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 HNRNPLP14866 589 aaKnown RBP eCLIP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 RHOQP17081 205 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 GOT1P17174 413 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 GRIA2P42262 883 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CTSOP43234 321 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 KIR2DL1P43626 348 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 DGKGP49619 791 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 NRLP54845 237 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 AIF1P55008 147 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CDH4P55283 916 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 KIF5AQ12840 1032 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 MTA1Q13330 715 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 DPYSL3Q14195 570 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 TAZQ16635 292 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 ARL13BQ3SXY8 428 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms