RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 FRMD8P1Q9BZ68 369 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 CEP44Q9C0F1 390 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 EPN3Q9H201 632 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 ERVK-5Q9HDB9 667 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 AGPAT5Q9NUQ2 364 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 RAB20Q9NX57 234 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 TMOD2Q9NZR1 351 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 UXTQ9UBK9 157 aaPredicted RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SRRDQ9UH36 339 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 AFDNP55196 1824 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 SLX4Q8IY92 1834 aa6.25□□□□□ -1.41
SMARCE1-208ENST00000474246 DAPK1P53355 1430 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM186AA6NE01 2351 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 CARMIL3Q8ND23 1372 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 A0A1W2PPW3 197 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 A0A1W2PQH9 124 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 A4D1N5 150 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 AGAP14A8MT82 685 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 RBBP9O75884 186 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 CKMP06732 381 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 PROS1P07225 676 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF865P0CJ78 1059 aaPredicted RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 KRT3P12035 628 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 GJA1P17302 382 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 NMT1P30419 496 aaKnown RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 GSTT1P30711 240 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 ALDH9A1P49189 494 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 RNF144AP50876 292 aaPredicted RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 NPEPPSP55786 919 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 PRKCEQ02156 737 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 TIGD6Q17RP2 521 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 TRIM61Q5EBN2 209 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 BMP2KLQ5H9B9 411 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 YOD1Q5VVQ6 348 aaPredicted RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 CAVIN1Q6NZI2 390 aaKnown RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 NOTUMQ6P988 496 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 TTC7BQ86TV6 843 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 FJX1Q86VR8 437 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF227Q86WZ6 799 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 HACE1Q8IYU2 909 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 MAB21L3Q8N8X9 362 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 OSCP1Q8WVF1 389 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 SCFD1Q8WVM8 642 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 ATL1Q8WXF7 558 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 DIO2Q92813 273 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 EXT2Q93063 718 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM120BQ96EK7 910 aaKnown RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 B3GNT5Q9BYG0 378 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 MRPL40Q9NQ50 206 aaKnown RBP6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 TMCO1Q9UM00 188 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.24□□□□□ -1.411e-6■■■□□ 18.8
SMARCE1-208ENST00000474246 CLCA3PQ9Y6N3 262 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 PCDH11XQ9BZA7 1347 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 PCDH11YQ9BZA8 1340 aa6.24□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 hCG_1809904A0A1W2PP81 198 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 A0A1W2PPE2 198 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 A0A1W2PR64 198 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 A0A1W2PRV1 198 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZSCAN5BA6NJL1 495 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 DDX3XO00571 662 aaKnown RBP eCLIP6.23□□□□□ -1.413e-10■■■■□ 24
SMARCE1-208ENST00000474246 ANGPT2O15123 496 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KMOO15229 486 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ARHGAP6O43182 974 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 INHAP05111 366 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 HMGN1P05114 100 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ADH1AP07327 375 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SELLP14151 372 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ADCYAP1R1P41586 468 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 PIP4K2AP48426 406 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF165P49910 485 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 DNM2P50570 870 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 IL2P60568 153 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 RNF4P78317 190 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 RELBQ01201 579 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 EPS8Q12929 822 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF177Q13360 481 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 XRCC4Q13426 336 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 DDX39BQ13838 428 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ADGRE1Q14246 886 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KRT31Q15323 416 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ALX1Q15699 326 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KCNA10Q16322 511 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 LEXMQ3ZCV2 418 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF805Q5CZA5 627 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SIGIRRQ6IA17 410 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KLHDC10Q6PID8 442 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 BRAPQ7Z569 592 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 CDKL3Q8IVW4 592 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 RTL3Q8N8U3 475 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KDF1Q8NAX2 398 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ATAD1Q8NBU5 361 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 OR13C2Q8NGS9 318 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 PDCD6IPQ8WUM4 868 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 BRI3BPQ8WY22 251 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM71F1Q96KD3 344 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 TEKT5Q96M29 485 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM83CQ9BQN1 747 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 PDCD2LQ9BRP1 358 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZKSCAN3Q9BRR0 538 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms