RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 BBS12Q6ZW61 710 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 SETD3Q86TU7 594 aaPredicted RBP10.63□□□□□ -0.71
CASC3-204ENST00000474190 RCOR2Q8IZ40 523 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 RASGEF1CQ8N431 466 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 CSGALNACT1Q8TDX6 532 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 COG1Q8WTW3 980 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 LRRN4Q8WUT4 740 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 HMCESQ96FZ2 354 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 CELF6Q96J87 481 aaKnown RBP10.63□□□□□ -0.71
CASC3-204ENST00000474190 NSMCE3Q96MG7 304 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 ACOX2Q99424 681 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 P2RY13Q9BPV8 354 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 KCNH6Q9H252 994 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 PDFQ9HBH1 243 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 LTB4R2Q9NPC1 389 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 POLR3BQ9NW08 1133 aaPredicted RBP10.63□□□□□ -0.71
CASC3-204ENST00000474190 DTLQ9NZJ0 730 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 DEC1Q9P2X7 70 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 SAE1Q9UBE0 346 aaPredicted RBP10.63□□□□□ -0.71
CASC3-204ENST00000474190 R3HDM2Q9Y2K5 976 aaKnown RBP10.63□□□□□ -0.71
CASC3-204ENST00000474190 STARD13Q9Y3M8 1113 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 JRKLQ9Y4A0 524 aa10.63□□□□□ -0.71
CASC3-204ENST00000474190 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.62□□□□□ -0.71
CASC3-204ENST00000474190 GOLGA6L9A6NEM1 432 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 RASA4BC9J798 803 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 RASA4O43374 803 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 PI15O43692 258 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 ADAM23O75077 832 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 MAP3K6O95382 1288 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 CYBBP04839 570 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 HNRNPLP14866 589 aaKnown RBP eCLIP10.62□□□□□ -0.71
CASC3-204ENST00000474190 OR1E1P30953 314 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 GRIA2P42262 883 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 DNA2P51530 1060 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 GNA12Q03113 381 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 NR1H3Q13133 447 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 ZNF177Q13360 481 aaPredicted RBP10.62□□□□□ -0.71
CASC3-204ENST00000474190 SERINC3Q13530 473 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 KRT81Q14533 505 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 RPS6KA1Q15418 735 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 TFDP3Q5H9I0 405 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 RNF219Q5W0B1 726 aaPredicted RBP10.62□□□□□ -0.71
CASC3-204ENST00000474190 GRAMD4Q6IC98 578 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 Q6ZS52 159 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 CCDC105Q8IYK2 499 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 CCDC33Q8N5R6 958 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 FAM3CQ92520 227 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 CLDN23Q96B33 292 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 MSANTD3Q96H12 275 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 PNKPQ96T60 521 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 HEMGNQ9BXL5 484 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 CALN1Q9BXU9 219 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 OSBPL8Q9BZF1 889 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 CARD9Q9H257 536 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 TBC1D17Q9HA65 648 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 ZDHHC4Q9NPG8 344 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 ELOVL2Q9NXB9 296 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 SMARCAL1Q9NZC9 954 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 VPS51Q9UID3 782 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 EFR3BQ9Y2G0 817 aa10.62□□□□□ -0.71
CASC3-204ENST00000474190 TICRRQ7Z2Z1 1910 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 KANSL1LA0AUZ9 987 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 H0Y626 953 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 J3KR12 359 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 K7ERQ8 282 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 RNF103O00237 685 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 ZNF185O15231 689 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 SMAD6O43541 496 aaKnown RBP10.61□□□□□ -0.71
CASC3-204ENST00000474190 KIF5CO60282 957 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 MAFKO60675 156 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 RHOCP08134 193 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 C7P10643 843 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 DESP17661 470 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 CXCR5P32302 372 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
CASC3-204ENST00000474190 ARL4AP40617 200 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
CASC3-204ENST00000474190 PAPOLAP51003 745 aaKnown RBP10.61□□□□□ -0.71
CASC3-204ENST00000474190 NDST2P52849 883 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 COPS2P61201 443 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 GNG11P61952 73 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 ETF1P62495 437 aaKnown RBP10.61□□□□□ -0.71
CASC3-204ENST00000474190 GALNT2Q10471 571 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 CDH18Q13634 790 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 IHHQ14623 411 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 C2orf27AQ580R0 203 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 C6orf118Q5T5N4 469 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 EGFLAMQ63HQ2 1017 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 MBLAC2Q68D91 279 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 ZNF783Q6ZMS7 281 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 B4GALNT4Q76KP1 1039 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 DCAF4L2Q8NA75 395 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 PRSS33Q8NF86 280 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 FRS2Q8WU20 508 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 CYB5D2Q8WUJ1 264 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
CASC3-204ENST00000474190 ALS2CR12Q96Q35 445 aa10.61□□□□□ -0.71
CASC3-204ENST00000474190 XPO6Q96QU8 1125 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms