RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 FBXO4Q9UKT5 387 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 SLC8A2Q9UPR5 921 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 STON1Q9Y6Q2 735 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 WASH3PC4AMC7 463 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 K7ESF4 209 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 SPOPO43791 374 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 RAMP2O60895 175 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 SRPRAP08240 638 aaKnown RBP12.25□□□□□ -0.45
VPS13D-204ENST00000469054 HOXB2P14652 356 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 ERCC2P18074 760 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 ETFBP38117 255 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 CTSOP43234 321 aaPredicted RBP12.25□□□□□ -0.45
VPS13D-204ENST00000469054 ECT2LQ008S8 904 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 CSTF1Q05048 431 aaKnown RBP12.25□□□□□ -0.45
VPS13D-204ENST00000469054 DPYSQ14117 519 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 POLD3Q15054 466 aaPredicted RBP12.25□□□□□ -0.45
VPS13D-204ENST00000469054 PDK2Q15119 407 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 ZFYVE27Q5T4F4 411 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 SERPINA13PQ6UXR4 307 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 RHOT1Q8IXI2 618 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 CAMKK1Q8N5S9 505 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 DCAF4L2Q8NA75 395 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 KDM1BQ8NB78 822 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 KCTD6Q8NC69 237 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 OR7D4Q8NG98 312 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 TSC1Q92574 1164 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 MYO19Q96H55 970 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 MRGPRX3Q96LB0 322 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 CSPG4P5Q96PW8 444 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 PSMB7Q99436 277 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 SPON2Q9BUD6 331 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 C2orf49Q9BVC5 232 aaPredicted RBP12.25□□□□□ -0.45
VPS13D-204ENST00000469054 TSGA10Q9BZW7 698 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 MAGEH1Q9H213 219 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 KCNH6Q9H252 994 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 TMEM245Q9H330 911 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 GOLPH3Q9H4A6 298 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 TRIM10Q9UDY6 481 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 ERVW-1Q9UQF0 538 aa12.25□□□□□ -0.45
VPS13D-204ENST00000469054 A0A1W2PQF6 199 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 MACROD2A1Z1Q3 448 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 SNAP91O60641 907 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 CD48P09326 243 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 CCDC175P0C221 793 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 TNNT1P13805 278 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 AMPD1P23109 780 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 IL4RP24394 825 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 PRKCHP24723 683 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 HOXA6P31267 233 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 NNMTP40261 264 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 DGKEP52429 567 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 YBEYP58557 167 aaPredicted RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 ST8SIA6P61647 398 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 IFI16Q16666 785 aaKnown RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 FNDC3BQ53EP0 1204 aaKnown RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 IL31Q6EBC2 164 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 TSSK4Q6SA08 328 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 DAAM2Q86T65 1068 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 UMODL1-AS1Q8N2C9 162 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 RNF10Q8N5U6 811 aaKnown RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 TSTD1Q8NFU3 115 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 RAPGEF5Q92565 580 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 ARHGEF2Q92974 986 aaKnown RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 HHIPQ96QV1 700 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 ZNF670Q9BS34 389 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 ACE2Q9BYF1 805 aaPredicted RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 NOL6Q9H6R4 1146 aaKnown RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 POLMQ9NP87 494 aaPredicted RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 RCOR3Q9P2K3 495 aaPredicted RBP12.24□□□□□ -0.45
VPS13D-204ENST00000469054 VPS51Q9UID3 782 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 SLCO3A1Q9UIG8 710 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 SLC25A13Q9UJS0 675 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 RAD54BQ9Y620 910 aa12.24□□□□□ -0.45
VPS13D-204ENST00000469054 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 RASA4BC9J798 803 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 CBX4O00257 560 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 DCLK1O15075 740 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 RASA4O43374 803 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 PSTPIP1O43586 416 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 KRT86O43790 486 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 SYNCRIPO60506 623 aaKnown RBP12.23□□□□□ -0.45
VPS13D-204ENST00000469054 ALDH1A2O94788 518 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 APBB3O95704 486 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 EPHX1P07099 455 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 SP9P0CG40 484 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 TDGF1P13385 188 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 HLA-EP13747 358 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 COL9A1P20849 921 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 GLDCP23378 1020 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 KDELR1P24390 212 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 ACVRL1P37023 503 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 STK19P49842 368 aaPredicted RBP12.23□□□□□ -0.45
VPS13D-204ENST00000469054 NDST2P52849 883 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 TCF15Q12870 199 aa12.23□□□□□ -0.45
VPS13D-204ENST00000469054 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms